RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 IRF1P10914 325 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 IFI30P13284 250 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 DNAJB1P25685 340 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 HSDL1Q3SXM5 330 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 XKRXQ6PP77 449 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 ANKRD13BQ86YJ7 626 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 GANCQ8TET4 914 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 GAB3Q8WWW8 586 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 LENG9Q96B70 501 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 LINGO1Q96FE5 620 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 ITPAQ9BY32 194 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 ELOVL4Q9GZR5 314 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 VPS4AQ9UN37 437 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 TCAF1Q9Y4C2 921 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 ACOX3O15254 700 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 INMTO95050 263 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 SLC6A2P23975 617 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 HNRNPDQ14103 355 aaKnown RBP17.55■□□□□ 0.4
SMPD4-202ENST00000409031 TXNRD3NBQ6F5E7 133 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 UGT2A3Q6UWM9 527 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 FAM83AQ86UY5 434 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 C11orf24Q96F05 449 aaPredicted RBP17.55■□□□□ 0.4
SMPD4-202ENST00000409031 EMILIN2Q9BXX0 1053 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 B3GNT5Q9BYG0 378 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 NLNQ9BYT8 704 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 FAM124BQ9H5Z6 455 aaPredicted RBP17.55■□□□□ 0.4
SMPD4-202ENST00000409031 DTLQ9NZJ0 730 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 NMBRP28336 390 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 ALDH9A1P49189 494 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 GPR65Q8IYL9 337 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 TMEM86AQ8N2M4 240 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 C18orf25Q96B23 403 aaPredicted RBP17.54■□□□□ 0.4
SMPD4-202ENST00000409031 SIPA1Q96FS4 1042 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 HEPHQ9BQS7 1158 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 ACAT2Q9BWD1 397 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 ATP13A1Q9HD20 1204 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 MKL2Q9ULH7 1088 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 PTX3P26022 381 aaPredicted RBP17.54■□□□□ 0.4
SMPD4-202ENST00000409031 IL1R2P27930 398 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 KIR3DL1P43629 444 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 IRF9Q00978 393 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 CPSF6Q16630 551 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMPD4-202ENST00000409031 ANXA8L1Q5VT79 327 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 R3HCC1LQ7Z5L2 792 aaKnown RBP17.54■□□□□ 0.4
SMPD4-202ENST00000409031 ELMOD2Q8IZ81 293 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 TRAPPC12Q8WVT3 735 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 BSNDQ8WZ55 320 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 SHISA4Q96DD7 197 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 NTPCRQ9BSD7 190 aaKnown RBP17.54■□□□□ 0.4
SMPD4-202ENST00000409031 CNPPD1Q9BV87 410 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 LRTM1Q9HBL6 345 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 VPS28Q9UK41 221 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 TYMPP19971 482 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 PTPN5P54829 565 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 NFATC3Q12968 1075 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 LAPTM4BQ86VI4 370 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 LRRC15Q8TF66 581 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 SEMA3CQ99985 751 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 SLC39A3Q9BRY0 314 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 HERC2P3Q9BVR0 1158 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 CDC14AQ9UNH5 594 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 BCL9O00512 1426 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 FOXD2O60548 495 aaPredicted RBP17.54■□□□□ 0.4
SMPD4-202ENST00000409031 ALDH1A1P00352 501 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 ZNF772Q68DY9 489 aaPredicted RBP17.54■□□□□ 0.4
SMPD4-202ENST00000409031 LRRC52Q8N7C0 313 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 GLB1L3Q8NCI6 653 aaPredicted RBP17.54■□□□□ 0.4
SMPD4-202ENST00000409031 MRPL45Q9BRJ2 306 aaKnown RBP17.54■□□□□ 0.4
SMPD4-202ENST00000409031 USP29Q9HBJ7 922 aa17.54■□□□□ 0.4
SMPD4-202ENST00000409031 TIMM13Q9Y5L4 95 aaPredicted RBP17.54■□□□□ 0.4
SMPD4-202ENST00000409031 SPATA31A1Q5TZJ5 1347 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 IFNA16P05015 189 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 ATXN8OSP0DMR3 200 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 E2F2Q14209 437 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 CGB2Q6NT52 195 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 GALNT6Q8NCL4 622 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 MED8Q96G25 268 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 MRIQ9BWK5 157 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 RPF2Q9H7B2 306 aaKnown RBP17.53■□□□□ 0.4
SMPD4-202ENST00000409031 ZNHIT2Q9UHR6 403 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 PRAMEF33A0A0G2JMD5 474 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 LOC100130705A0A1B0GUX0 176 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 H3BRB1 525 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 PRAMEF10O60809 474 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 CLIC3O95833 236 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 CEACAM7Q14002 265 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 GALNT3Q14435 633 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 TUT1Q9H6E5 874 aaKnown RBP17.53■□□□□ 0.4
SMPD4-202ENST00000409031 MYOZ2Q9NPC6 264 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 DYRK3O43781 588 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 ENDOD1O94919 500 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 IMPDH1P20839 514 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 OR1G1P47890 313 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 CD83Q01151 205 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 CDHR3Q6ZTQ4 885 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 DET1Q7L5Y6 550 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 DNAJB8Q8NHS0 232 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 OSMRQ99650 979 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 GPN1Q9HCN4 374 aaPredicted RBP17.53■□□□□ 0.4
SMPD4-202ENST00000409031 DLX3O60479 287 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms