RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 CHI3L2Q15782 390 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 SMAD1Q15797 465 aaKnown RBP9.72□□□□□ -0.85
POLR1A-202ENST00000409024 TMEM52BQ4KMG9 183 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 LIPMQ5VYY2 423 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 PSAPL1Q6NUJ1 521 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 C16orf46Q6P387 395 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 TECPR1Q7Z6L1 1165 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 LDB1Q86U70 411 aaPredicted RBP9.72□□□□□ -0.85
POLR1A-202ENST00000409024 SERPINA9Q86WD7 417 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 CRLF3Q8IUI8 442 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 NXPE1Q8N323 547 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 TMEM151AQ8N4L1 468 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 GBP7Q8N8V2 638 aaPredicted RBP9.72□□□□□ -0.85
POLR1A-202ENST00000409024 GPR26Q8NDV2 337 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 PIP4K2CQ8TBX8 421 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 PPP4R1Q8TF05 950 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 KCTD4Q8WVF5 259 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 STON2Q8WXE9 905 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 NXNL1Q96CM4 212 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 SCYL1Q96KG9 808 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 BIRC8Q96P09 236 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 PANX3Q96QZ0 392 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 NDNQ99608 321 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 ZSCAN5AQ9BUG6 496 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 TRIM55Q9BYV6 548 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 FAM83DQ9H4H8 585 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 STN1Q9H668 368 aaKnown RBP9.72□□□□□ -0.85
POLR1A-202ENST00000409024 PCDH12Q9NPG4 1184 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 IGSF5Q9NSI5 407 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 CDH22Q9UJ99 828 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 CRLS1Q9UJA2 301 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.72□□□□□ -0.85
POLR1A-202ENST00000409024 DHRS7Q9Y394 339 aa9.72□□□□□ -0.85
POLR1A-202ENST00000409024 MUC22E2RYF6 1773 aaPredicted RBP9.72□□□□□ -0.85
POLR1A-202ENST00000409024 ZNF106Q9H2Y7 1883 aaKnown RBP9.72□□□□□ -0.85
POLR1A-202ENST00000409024 DOCK8Q8NF50 2099 aa9.71□□□□□ -0.85
POLR1A-202ENST00000409024 CFAP47Q6ZTR5 3102 aa9.71□□□□□ -0.85
POLR1A-202ENST00000409024 SYCE1LA8MT33 242 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 CFAP99D6REC4 459 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 E5RI56 91 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 KPNA3O00505 521 aaPredicted RBP9.71□□□□□ -0.86
POLR1A-202ENST00000409024 AREL1O15033 823 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 KPNA5O15131 536 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 AP1G1O43747 822 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 NPHS1O60500 1241 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 MAGEC1O60732 1142 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 AP2A2O94973 939 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 PDGFBP01127 241 aaPredicted RBP9.71□□□□□ -0.86
POLR1A-202ENST00000409024 SLC4A1P02730 911 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 C1SP09871 688 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 TPBGLP0DKB5 382 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 CBSLP0DN79 551 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 FGF3P11487 239 aaPredicted RBP9.71□□□□□ -0.86
POLR1A-202ENST00000409024 CBSP35520 551 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 IL12RB1P42701 662 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 ABCG1P45844 678 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 IL2P60568 153 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 MRPS21P82921 87 aaKnown RBP9.71□□□□□ -0.86
POLR1A-202ENST00000409024 NFKB2Q00653 900 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 TIAL1Q01085 375 aaKnown RBP eCLIP9.71□□□□□ -0.86
POLR1A-202ENST00000409024 OCRLQ01968 901 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 PPARDQ03181 441 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 GALNT1Q10472 559 aaPredicted RBP9.71□□□□□ -0.86
POLR1A-202ENST00000409024 BST1Q10588 318 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 SFSWAPQ12872 951 aaKnown RBP9.71□□□□□ -0.86
POLR1A-202ENST00000409024 CSHL1Q14406 222 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 CHRNA6Q15825 494 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 FBXO43Q4G163 708 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 TECRLQ5HYJ1 363 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 SPDYAQ5MJ70 313 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 LDLRAP1Q5SW96 308 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 SDE2Q6IQ49 451 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 FBXL19Q6PCT2 694 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 C6orf89Q6UWU4 347 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 FAM151BQ6UXP7 276 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 LIPIQ6XZB0 460 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 ERN2Q76MJ5 926 aaKnown RBP9.71□□□□□ -0.86
POLR1A-202ENST00000409024 PARS2Q7L3T8 475 aaKnown RBP9.71□□□□□ -0.86
POLR1A-202ENST00000409024 OTOAQ7RTW8 1153 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 TSPAN33Q86UF1 283 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 C10orf107Q8IVU9 208 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 STAG3L4Q8TBR4 150 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 INPP5DQ92835 1189 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 KIAA1191Q96A73 305 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 VPS35Q96QK1 796 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 SMIM14Q96QK8 99 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 COPS8Q99627 209 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 TRMOQ9BU70 441 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 RSPH9Q9H1X1 276 aaPredicted RBP9.71□□□□□ -0.86
POLR1A-202ENST00000409024 C12orf65Q9H3J6 166 aaKnown RBP9.71□□□□□ -0.86
POLR1A-202ENST00000409024 PRSS16Q9NQE7 514 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 TRMT6Q9UJA5 497 aaKnown RBP9.71□□□□□ -0.86
POLR1A-202ENST00000409024 SCML1Q9UN30 329 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 USH1CQ9Y6N9 552 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 STON1Q9Y6Q2 735 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 COL4A3Q01955 1670 aa9.71□□□□□ -0.86
POLR1A-202ENST00000409024 MAP1BP46821 2468 aaKnown RBP9.7□□□□□ -0.86
POLR1A-202ENST00000409024 SPECC1L-ADORA2AF8WAN1 911 aa9.7□□□□□ -0.86
POLR1A-202ENST00000409024 SLCO1B7G3V0H7 640 aa9.7□□□□□ -0.86
POLR1A-202ENST00000409024 WNT9AO14904 365 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms