RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 GGT5P36269 586 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 HSPA7P48741 367 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 NADK2Q4G0N4 442 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 MILR1Q7Z6M3 343 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 CDK5RAP1Q96SZ6 601 aaKnown RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 TBCDQ9BTW9 1192 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 TNKS2Q9H2K2 1166 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 TFB2MQ9H5Q4 396 aaKnown RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 KLQ9UEF7 1012 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 LOC285095A0A1B0GVY8 99 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 ANKRD66B4E2M5 251 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 NOL3O60936 208 aaKnown RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 E2F6O75461 281 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 CAPN1P07384 714 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 CAPN3P20807 821 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 TPP2P29144 1249 aaPredicted RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 AKT1P31749 480 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 UFM1P61960 85 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 NRG1Q02297 640 aaPredicted RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 TAF1AQ15573 450 aaPredicted RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 ZIK1Q3SY52 487 aaPredicted RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 CWF19L1Q69YN2 538 aaKnown RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 UGT3A1Q6NUS8 523 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 EFL1Q7Z2Z2 1120 aaKnown RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 LYSMD3Q7Z3D4 306 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 CLHC1Q8NHS4 586 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 FIG4Q92562 907 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 THEGQ9P2T0 379 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 RIMS3Q9UJD0 308 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 PCDHGB4Q9UN71 923 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 POLR3HQ9Y535 204 aaPredicted RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 PCDHGB5Q9Y5G0 923 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 C2orf78A6NCI8 922 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 MLYCDO95822 493 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 ALDH1A1P00352 501 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 INHAP05111 366 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 GALTP07902 379 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 ITGALP20701 1170 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 UGT1A1P22309 533 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 UGT1A4P22310 534 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 MZF1P28698 734 aaPredicted RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 UGT1A3P35503 534 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 UGT1A5P35504 534 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 CDH15P55291 814 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 RPL38P63173 70 aaKnown RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 C18orf21Q32NC0 220 aaPredicted RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 KIAA1191Q96A73 305 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 PSKH2Q96QS6 385 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 MRPL9Q9BYD2 267 aaKnown RBP11.8□□□□□ -0.52
PCNX4-204ENST00000406949 CIPCQ9C0C6 399 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 UBAP1Q9NZ09 502 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 MYRFQ9Y2G1 1151 aa11.8□□□□□ -0.52
PCNX4-204ENST00000406949 ZNF7P17097 686 aaPredicted RBP11.79□□□□□ -0.52
PCNX4-204ENST00000406949 ATP6V1B2P21281 511 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 SGSHP51688 502 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 MAPK10P53779 464 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 LIPEQ05469 1076 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 RFTN1Q14699 578 aaPredicted RBP11.79□□□□□ -0.52
PCNX4-204ENST00000406949 LRRC73Q5JTD7 316 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 AFMIDQ63HM1 303 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 ZBTB46Q86UZ6 589 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 RETREG3Q86VR2 466 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 NPAS4Q8IUM7 802 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 OFCC1Q8IZS5 231 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 ARL14EPQ8N8R7 260 aaPredicted RBP11.79□□□□□ -0.52
PCNX4-204ENST00000406949 MDGA1Q8NFP4 955 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 TCF12Q99081 682 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 INTS10Q9NVR2 710 aaKnown RBP11.79□□□□□ -0.52
PCNX4-204ENST00000406949 LSM7Q9UK45 103 aaKnown RBP11.79□□□□□ -0.52
PCNX4-204ENST00000406949 PRMT5O14744 637 aaPredicted RBP11.79□□□□□ -0.52
PCNX4-204ENST00000406949 CLOCKO15516 846 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 HOXA2O43364 376 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 PRAMEF1O95521 474 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 CLIC3O95833 236 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 ATF6P18850 670 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 GDF5P43026 501 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 BCL2L1Q07817 233 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 MTA1Q13330 715 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 LRP8Q14114 963 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 PRMT9Q6P2P2 845 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 LARP4Q71RC2 724 aaKnown RBP eCLIP11.79□□□□□ -0.52
PCNX4-204ENST00000406949 DET1Q7L5Y6 550 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 TMCO2Q7Z6W1 182 aaPredicted RBP11.79□□□□□ -0.52
PCNX4-204ENST00000406949 OR52B6Q8NGF0 335 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 LRRC58Q96CX6 371 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 NSMCE2Q96MF7 247 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 ALG2Q9H553 416 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 RALGAPA2Q2PPJ7 1873 aa11.79□□□□□ -0.52
PCNX4-204ENST00000406949 LCHNA4D1U4 455 aa11.78□□□□□ -0.52
PCNX4-204ENST00000406949 K7ERQ8 282 aa11.78□□□□□ -0.52
PCNX4-204ENST00000406949 HOXD9P28356 352 aaPredicted RBP11.78□□□□□ -0.52
PCNX4-204ENST00000406949 SLC7A1P30825 629 aa11.78□□□□□ -0.52
PCNX4-204ENST00000406949 POLR2JP52435 117 aaKnown RBP11.78□□□□□ -0.52
PCNX4-204ENST00000406949 PRKG2Q13237 762 aa11.78□□□□□ -0.52
PCNX4-204ENST00000406949 DDX39BQ13838 428 aaKnown RBP11.78□□□□□ -0.52
PCNX4-204ENST00000406949 ADGRF1Q5T601 910 aa11.78□□□□□ -0.52
PCNX4-204ENST00000406949 SYVN1Q86TM6 617 aa11.78□□□□□ -0.52
PCNX4-204ENST00000406949 MIPOL1Q8TD10 442 aa11.78□□□□□ -0.52
PCNX4-204ENST00000406949 DPF3Q92784 378 aa11.78□□□□□ -0.52
PCNX4-204ENST00000406949 ZFRQ96KR1 1074 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms