RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 TSSK4Q6SA08 328 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 ADAMTSL4Q6UY14 1074 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 CMC1Q7Z7K0 106 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 TRIM74Q86UV6 250 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 SLC41A1Q8IVJ1 513 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 CNPY4Q8N129 248 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 TMEM105Q8N8V8 129 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 MYOCQ99972 504 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 AARSD1Q9BTE6 412 aaKnown RBP20.27■□□□□ 0.83
CHKB-201ENST00000406938 CLPBQ9H078 707 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 INVSQ9Y283 1065 aa20.27■□□□□ 0.83
CHKB-201ENST00000406938 TTC28Q96AY4 2481 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 HMGB1P1B2RPK0 211 aaPredicted RBP20.26■□□□□ 0.83
CHKB-201ENST00000406938 RFPL1O75677 317 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 FSBPO95073 299 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 ESR1P03372 595 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 MT-ND3P03897 115 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 IGHV4-34P06331 123 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 RPS3P23396 243 aaKnown RBP eCLIP20.26■□□□□ 0.83
CHKB-201ENST00000406938 NSG1P42857 185 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 SERPINB8P50452 374 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 CCR5P51681 352 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 MAGOHP61326 146 aaKnown RBP20.26■□□□□ 0.83
CHKB-201ENST00000406938 DNAJC3Q13217 504 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 INPP5AQ14642 412 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 USP10Q14694 798 aaKnown RBP20.26■□□□□ 0.83
CHKB-201ENST00000406938 ZNF648Q5T619 568 aaPredicted RBP20.26■□□□□ 0.83
CHKB-201ENST00000406938 HECTD2Q5U5R9 776 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 FAM45BPQ6NSW5 357 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 TIFABQ6ZNK6 161 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 EXOC3L1Q86VI1 746 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 HEATR4Q86WZ0 1026 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 CLDN19Q8N6F1 224 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 FAM45AQ8TCE6 357 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 ISL2Q96A47 359 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 SPACA7Q96KW9 195 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 CCDC68Q9H2F9 335 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 SNX15Q9NRS6 342 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 PRSS21Q9Y6M0 314 aa20.26■□□□□ 0.83
CHKB-201ENST00000406938 LAMTOR5O43504 91 aa20.25■□□□□ 0.83
CHKB-201ENST00000406938 PKMP14618 531 aaKnown RBP20.25■□□□□ 0.83
CHKB-201ENST00000406938 TEAD1P28347 426 aa20.25■□□□□ 0.83
CHKB-201ENST00000406938 HOXA6P31267 233 aa20.25■□□□□ 0.83
CHKB-201ENST00000406938 PGGT1BP53609 377 aa20.25■□□□□ 0.83
CHKB-201ENST00000406938 CDKN2DP55273 166 aa20.25■□□□□ 0.83
CHKB-201ENST00000406938 POU4F1Q01851 419 aa20.25■□□□□ 0.83
CHKB-201ENST00000406938 DENND6BQ8NEG7 585 aa20.25■□□□□ 0.83
CHKB-201ENST00000406938 DCUN1D1Q96GG9 259 aa20.25■□□□□ 0.83
CHKB-201ENST00000406938 OLFM1Q99784 485 aa20.25■□□□□ 0.83
CHKB-201ENST00000406938 WDR26Q9H7D7 661 aa20.25■□□□□ 0.83
CHKB-201ENST00000406938 MBD1Q9UIS9 605 aaPredicted RBP20.25■□□□□ 0.83
CHKB-201ENST00000406938 GNPTGQ9UJJ9 305 aa20.25■□□□□ 0.83
CHKB-201ENST00000406938 PCDHB1Q9Y5F3 818 aa20.25■□□□□ 0.83
CHKB-201ENST00000406938 CFAP99D6REC4 459 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 GOLGA8RI6L899 631 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 NDUFS2O75306 463 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 TDGF1P13385 188 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 KRT4P19013 534 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 MSH3P20585 1137 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 HNRNPA2B1P22626 353 aaKnown RBP20.24■□□□□ 0.83
CHKB-201ENST00000406938 TYK2P29597 1187 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 MAGEA12P43365 314 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 TAS2R39P59534 338 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 CDK3Q00526 305 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 USP39Q53GS9 565 aaKnown RBP20.24■□□□□ 0.83
CHKB-201ENST00000406938 CEP97Q8IW35 865 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 C4orf33Q8N1A6 199 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 BIRC7Q96CA5 298 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 HIC2Q96JB3 615 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 EBF2Q9HAK2 575 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 SENP1Q9P0U3 644 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 VWA7Q9Y334 891 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 OR1A2Q9Y585 309 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 NIPSNAP2O75323 286 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 RALBP11234 206 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 CREB1P16220 341 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 STMN1P16949 149 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 FDXRP22570 491 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 TRIM23P36406 574 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 POLD2P49005 469 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 SLC12A2P55011 1212 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 ZNF460Q14592 562 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 ZKSCAN8Q15776 578 aaPredicted RBP20.24■□□□□ 0.83
CHKB-201ENST00000406938 PTRHD1Q6GMV3 140 aaKnown RBP20.24■□□□□ 0.83
CHKB-201ENST00000406938 DET1Q7L5Y6 550 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 PIM3Q86V86 326 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 C1orf210Q8IVY1 113 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 HEXDCQ8WVB3 486 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 FAM136AQ96C01 138 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 COX14Q96I36 57 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 TEX101Q9BY14 249 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 PCMTD2Q9NV79 361 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 MED16Q9Y2X0 877 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.24■□□□□ 0.83
CHKB-201ENST00000406938 ACTL7BQ9Y614 415 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 COMMD10Q9Y6G5 202 aa20.24■□□□□ 0.83
CHKB-201ENST00000406938 OAS3Q9Y6K5 1087 aaKnown RBP20.24■□□□□ 0.83
CHKB-201ENST00000406938 CCDC163A0A0D9SF12 145 aa20.23■□□□□ 0.83
CHKB-201ENST00000406938 IQCF5A8MTL0 148 aa20.23■□□□□ 0.83
CHKB-201ENST00000406938 PHGDHO43175 533 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms