RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 PIDD1Q9HB75 910 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 MID1IP1Q9NPA3 183 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 COPG1Q9Y678 874 aaKnown RBP24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 A0A088AWK7 358 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 CDK14O94921 469 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 UGT2B4P06133 528 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 ITGAXP20702 1163 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 ACRV1P26436 265 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 RECQLP46063 649 aaPredicted RBP24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 NAA20P61599 178 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 SH3BP2P78314 561 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 SEMG2Q02383 582 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 HERC3Q15034 1050 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 ACSBG2Q5FVE4 666 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 ANKS6Q68DC2 871 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 TXNDC11Q6PKC3 985 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 RBM23Q86U06 439 aaKnown RBP24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 STMN2Q93045 179 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 ZNF707Q96C28 371 aaPredicted RBP24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 MRGBPQ9NV56 204 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 MARK1Q9P0L2 795 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 ERVW-1Q9UQF0 538 aa24.44■■□□□ 1.5
DNMT3A-206ENST00000406659 MYO7AQ13402 2215 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 A0A1W2PQ67 120 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 H0Y3Z8 333 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 STX16-NPEPL1H3BU86 382 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 STX16O14662 325 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 SNX2O60749 519 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 GPC4O75487 556 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 FGF4P08620 206 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 TRMT5Q32P41 509 aaKnown RBP24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 LRRC66Q68CR7 880 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 AHI1Q8N157 1196 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 TRPC4APQ8TEL6 797 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 NSUN5Q96P11 429 aaKnown RBP24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 BOCQ9BWV1 1114 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 ZBTB26Q9HCK0 441 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 CD274Q9NZQ7 290 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 SLC7A8Q9UHI5 535 aa24.43■■□□□ 1.5
DNMT3A-206ENST00000406659 NCF1BA6NI72 391 aaPredicted RBP24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 NCF1CA8MVU1 366 aaPredicted RBP24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 ANP32DO95626 131 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 POU2F2P09086 479 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 NCF1P14598 390 aaPredicted RBP24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 CA5AP35218 305 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 CLCQ05315 142 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 GEN1Q17RS7 908 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 GDPD4Q6W3E5 623 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 KIAA0907Q7Z7F0 614 aaPredicted RBP24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 DEFB107AQ8IZN7 70 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 PELI3Q8N2H9 469 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 CHST14Q8NCH0 376 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 PDLIM5Q96HC4 596 aaKnown RBP24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 CIPCQ9C0C6 399 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 AIM2O14862 343 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 AZIN1O14977 448 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 UBDO15205 165 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 KLK8O60259 260 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 CHRM1P11229 460 aaPredicted RBP24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 POLR2LP62875 67 aaKnown RBP24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 GPM6BQ13491 265 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 C1orf146Q5VVC0 180 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 CHSY3Q70JA7 882 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 PLPP6Q8IY26 295 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 GPR26Q8NDV2 337 aa24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 MCCC1Q96RQ3 725 aaPredicted RBP24.42■■□□□ 1.5
DNMT3A-206ENST00000406659 SCN8AQ9UQD0 1980 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 GRXCR1A8MXD5 290 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 PPP6CO00743 305 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 HSPA1AP0DMV8 641 aaKnown RBP24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 HSPA1BP0DMV9 641 aaKnown RBP24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 ITGB6P18564 788 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 NNMTP40261 264 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 LCP2Q13094 533 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 UGT3A2Q3SY77 523 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 NXPE1Q8N323 547 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 CELF5Q8N6W0 485 aaKnown RBP24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 OR2A12Q8NGT7 310 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 ITFG1Q8TB96 612 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 SMG7Q92540 1137 aaKnown RBP24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 PBXIP1Q96AQ6 731 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 C19orf60Q96EN9 201 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 CCDC97Q96F63 343 aaPredicted RBP24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 KLHL32Q96NJ5 620 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 BRD9Q9H8M2 597 aa24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 LAMA2P24043 3122 aaKnown RBP24.41■■□□□ 1.5
DNMT3A-206ENST00000406659 WASH3PC4AMC7 463 aa24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 PSMG1O95456 288 aa24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 RPS17P08708 135 aaKnown RBP24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 RGS4P49798 205 aa24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 PTSQ03393 145 aa24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 WLSQ5T9L3 541 aa24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 TMEM215Q68D42 235 aa24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 RIPOR1Q6ZS17 1223 aa24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 CFAP61Q8NHU2 1237 aa24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 MYLIPQ8WY64 445 aa24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 EBF2Q9HAK2 575 aa24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 SEMA4BQ9NPR2 832 aaPredicted RBP24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 PRSS21Q9Y6M0 314 aa24.4■■□□□ 1.5
DNMT3A-206ENST00000406659 ZNF106Q9H2Y7 1883 aaKnown RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms