RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 EGLN2Q96KS0 407 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 SMC6Q96SB8 1091 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 CITED2Q99967 270 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 PIGMQ9H3S5 423 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 ESRP2Q9H6T0 727 aaKnown RBP4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 ACSS1Q9NUB1 689 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 OR6C3Q9NZP0 311 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 STK26Q9P289 416 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 WDR35Q9P2L0 1181 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 IL36RNQ9UBH0 155 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 HACL1Q9UJ83 578 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 ACSL5Q9ULC5 683 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 PCDHA12Q9UN75 941 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 CDC42BPBQ9Y5S2 1711 aa4.76□□□□□ -1.65
HMGB3P18-201ENST00000406327 ZCCHC11Q5TAX3 1644 aaKnown RBP4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 PLXNC1O60486 1568 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 SCAPERQ9BY12 1400 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 EIF4E1BA6NMX2 242 aaKnown RBP4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 ZNF814B7Z6K7 855 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 M0QZ24 198 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 ITM2AO43736 263 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 ATG13O75143 517 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 RSL1D1O76021 490 aaKnown RBP4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 RECQL5O94762 991 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 ICAM1P05362 532 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 CYC1P08574 325 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 ARSBP15848 533 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 MUTP22033 750 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 PTAFRP25105 342 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 MPGP29372 298 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 ATP5DP30049 168 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 KCNJ4P48050 445 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 SUOXP51687 545 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 CSNK2A1P68400 391 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 PPARDQ03181 441 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 FOXM1Q08050 763 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 TRIP6Q15654 476 aaKnown RBP4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 C10orf25Q5T742 122 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 DCAF12L2Q5VW00 463 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 DLK2Q6UY11 383 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 FAM47EQ6ZV65 393 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 INTS8Q75QN2 995 aaKnown RBP4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 YTHDF3Q7Z739 585 aaKnown RBP4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 AACSQ86V21 672 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 IQCHQ86VS3 1027 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 CSNK2A3Q8NEV1 391 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 ENGASEQ8NFI3 743 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 ARRDC2Q8TBH0 407 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 IGFBPL1Q8WX77 278 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 DNAAF4Q8WXU2 420 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 MRPS27Q92552 414 aaKnown RBP4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 JAKMIP1Q96N16 626 aaKnown RBP4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 LRFN5Q96NI6 719 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 CDRT15Q96T59 188 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 HGH1Q9BTY7 390 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 SLCO5A1Q9H2Y9 848 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 KCNK15Q9H427 330 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 CHMP1AQ9HD42 196 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 ABCF3Q9NUQ8 709 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 ZNF112Q9UJU3 913 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 RAI2Q9Y5P3 530 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 COX11Q9Y6N1 276 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 ABCC1P33527 1531 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 GPRASP1Q5JY77 1395 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 FANCAO15360 1455 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 MAGI2Q86UL8 1455 aa4.75□□□□□ -1.65
HMGB3P18-201ENST00000406327 POLR2AP24928 1970 aaKnown RBP4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 UNC13BO14795 1591 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 PTPRTO14522 1441 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 EDDM13A0A1B0GTR0 161 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 KCNU1A8MYU2 1149 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 H0Y626 953 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 VWA5AO00534 786 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 HS3ST1O14792 307 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 ASAP2O43150 1006 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 PRAMEF11O60813 436 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 TRUB2O95900 331 aaKnown RBP4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 NR2F2P24468 414 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 HNRNPH1P31943 449 aaKnown RBP4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 KRT2P35908 639 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 TNNT3P45378 269 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 SELENOVP59797 346 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 COL10A1Q03692 680 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 RALGDSQ12967 914 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 GPR18Q14330 331 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 ODF2Q5BJF6 829 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 MANEAQ5SRI9 462 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 OTUD1Q5VV17 481 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 HIST2H2BCQ6DN03 193 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 HIST2H2BDQ6DRA6 164 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 ANKRD54Q6NXT1 300 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 TPRG1Q6ZUI0 275 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 ADGRG3Q86Y34 549 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 MAML2Q8IZL2 1156 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 ARFGAP1Q8N6T3 406 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 HM13Q8TCT9 377 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 DPF1Q92782 380 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 TESK2Q96S53 571 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 EGFL8Q99944 293 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms