RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.32□□□□□ -1.721e-6■■■■□ 21.8
SMC6-203ENST00000402989 LARP4Q71RC2 724 aaKnown RBP eCLIP4.32□□□□□ -1.721e-6■□□□□ 8.9
SMC6-203ENST00000402989 WFDC5Q8TCV5 224 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 ASB9Q96DX5 294 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 RNF145Q96MT1 663 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 KCTD14Q9BQ13 255 aaPredicted RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 DCUN1D5Q9BTE7 237 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 EFHD1Q9BUP0 239 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 CD84Q9UIB8 345 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 PKP3Q9Y446 797 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 ZFC3H1O60293 1989 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 NLRC5Q86WI3 1866 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 LOC285095A0A1B0GVY8 99 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 KANSL1LA0AUZ9 987 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 DHRS12A0PJE2 317 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 CCDC154A6NI56 674 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 UNCXA6NJT0 531 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 OR6C75A6NL08 312 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 UPK3BL1B0FP48 263 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 UPK3BL2E5RIL1 263 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 H3BSA7 217 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 AHCYL1O43865 530 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 FOXD2O60548 495 aaPredicted RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 MTX2O75431 263 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 STC2O76061 302 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 PARNO95453 639 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 S100BP04271 92 aaPredicted RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 PYGLP06737 847 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 CAPN1P07384 714 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 GALTP07902 379 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 SLC2A4P14672 509 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 GPX3P22352 226 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 HK2P52789 917 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 RPL38P63173 70 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 LCP2Q13094 533 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 GPR17Q13304 367 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 BIRC2Q13490 618 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 ARHGEF7Q14155 803 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 CWF19L1Q69YN2 538 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 HMBOX1Q6NT76 420 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 GPRIN3Q6ZVF9 776 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 ADGRG6Q86SQ4 1221 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 LRRC49Q8IUZ0 686 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 METTL25Q8N6Q8 603 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 FBXO30Q8TB52 745 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 MAGEE2Q8TD90 523 aaPredicted RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 NCLNQ969V3 563 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 FBXL20Q96IG2 436 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 TRAPPC9Q96Q05 1148 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 ATOH8Q96SQ7 321 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 NSUN3Q9H649 340 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 ASB8Q9H765 288 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 SYTL2Q9HCH5 934 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 TMEM161AQ9NX61 479 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 MAP10Q9P2G4 905 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 KLQ9UEF7 1012 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 SQORQ9Y6N5 450 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 PTPRDP23468 1912 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 CEP290O15078 2479 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 PRSS51A0A1B0GVH4 220 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 SYN3O14994 580 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 SMAD6O43541 496 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 LRATO95237 230 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 TNFAIP8O95379 198 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 CYBBP04839 570 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 GSNP06396 782 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 FESP07332 822 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 SMIM18P0DKX4 95 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 SELPP16109 830 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 EEF1B2P24534 225 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 PSMA4P25789 261 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 CSKP41240 450 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 HK3P52790 923 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 TPD52P55327 224 aaPredicted RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 YBEYP58557 167 aaPredicted RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 RHDQ02161 417 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 LIPEQ05469 1076 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 DDX39BQ13838 428 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 IKBKEQ14164 716 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 HERC3Q15034 1050 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 RBBP5Q15291 538 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 MYLK3Q32MK0 819 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 CHSY3Q70JA7 882 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 SLC15A3Q8IY34 581 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 LRRC43Q8N309 656 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 GALNT15Q8N3T1 639 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 TMEM102Q8N9M5 508 aaPredicted RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 OR2T34Q8NGX1 318 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 OR2T11Q8NH01 316 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 OR2T3Q8NH03 318 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 LKAAEAR1Q8TD35 194 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 FIG4Q92562 907 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 FUBP1Q96AE4 644 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 SLCO4A1Q96BD0 722 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 ULK4Q96C45 1275 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 MAELQ96JY0 434 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 CASD1Q96PB1 797 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 PLEKHG4BQ96PX9 1271 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 C17orf80Q9BSJ5 609 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms