RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 F7P08709 466 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-204ENST00000401473 PAMP19021 973 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 ITGALP20701 1170 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 THOP1P52888 689 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 TMEM115Q12893 351 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-204ENST00000401473 EIF2B5Q13144 721 aaKnown RBP15.78■□□□□ 0.12
HMGA1-204ENST00000401473 NEPROQ6NW34 567 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 TAS2R42Q7RTR8 314 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 ADGRG6Q86SQ4 1221 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 GPR161Q8N6U8 529 aaKnown RBP15.78■□□□□ 0.12
HMGA1-204ENST00000401473 DDHD1Q8NEL9 900 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 GDAP1Q8TB36 358 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 TSACCQ96A04 125 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-204ENST00000401473 FGF22Q9HCT0 170 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 RXFP3Q9NSD7 469 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 SEMA4GQ9NTN9 838 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 ATXN10Q9UBB4 475 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 CRLS1Q9UJA2 301 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 PCDH15Q96QU1 1955 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 CEP250Q9BV73 2442 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 CACNB4O00305 520 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-204ENST00000401473 ZNF806P0C7X5 589 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 ACRV1P26436 265 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 DPP6P42658 865 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 CTSKP43235 329 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 KIAA1024LP59773 190 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 TEAD4Q15561 434 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 DBN1Q16643 649 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 FASTKD1Q53R41 847 aaKnown RBP15.78■□□□□ 0.12
HMGA1-204ENST00000401473 DCP2Q8IU60 420 aaKnown RBP15.78■□□□□ 0.12
HMGA1-204ENST00000401473 PHYKPLQ8IUZ5 450 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 DENND6AQ8IWF6 608 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 OR56A4Q8NGH8 313 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 CERS2Q96G23 380 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 TXLNGYQ9BZA5 131 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 TSPYL1Q9H0U9 437 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 CDC42EP4Q9H3Q1 356 aaKnown RBP15.78■□□□□ 0.12
HMGA1-204ENST00000401473 CATSPERZQ9NTU4 200 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 SLC6A14Q9UN76 642 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 SLC17A4Q9Y2C5 497 aa15.78■□□□□ 0.12
HMGA1-204ENST00000401473 IGLV3-16A0A075B6K0 115 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 LNP1A1A4G5 178 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 OR1I1O60431 355 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 ASMTLO95671 621 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 C1QAP02745 245 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 HTR1BP28222 390 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 C21orf59P57076 290 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 GRIK2Q13002 908 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 CTBP1Q13363 440 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 ZNF789Q5FWF6 425 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 DOK6Q6PKX4 331 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 MACC1Q6ZN28 852 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 KCNMB4Q86W47 210 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 CILP2Q8IUL8 1156 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 GPR150Q8NGU9 434 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 GSDMBQ8TAX9 411 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 OR1E3Q8WZA6 343 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 WDR92Q96MX6 357 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 OR2AG1Q9H205 316 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 TCEAL2Q9H3H9 227 aaPredicted RBP15.77■□□□□ 0.11
HMGA1-204ENST00000401473 NINJ2Q9NZG7 142 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 SLC17A6Q9P2U8 582 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 LRP4O75096 1905 aa15.77■□□□□ 0.11
HMGA1-204ENST00000401473 TCRBV9S1A1TA0A576 114 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 SCAMP1O15126 338 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 GFRA3O60609 400 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 MAGEC1O60732 1142 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 DNAJC6O75061 913 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 CDK14O94921 469 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 ZNF8P17098 575 aaPredicted RBP15.76■□□□□ 0.11
HMGA1-204ENST00000401473 PTK2BQ14289 1009 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 ALG11Q2TAA5 492 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 LDLRAP1Q5SW96 308 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 TEDDM1Q5T9Z0 273 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 MARK2Q7KZI7 788 aaKnown RBP15.76■□□□□ 0.11
HMGA1-204ENST00000401473 CLDN19Q8N6F1 224 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 RASGEF1AQ8N9B8 481 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 OR2I1PQ8NGU4 316 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 SKA1Q96BD8 255 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 SGF29Q96ES7 293 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 PDXPQ96GD0 296 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 SCARF2Q96GP6 870 aaPredicted RBP15.76■□□□□ 0.11
HMGA1-204ENST00000401473 PPANQ9NQ55 473 aaKnown RBP15.76■□□□□ 0.11
HMGA1-204ENST00000401473 SMYD2Q9NRG4 433 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 IARS2Q9NSE4 1012 aaKnown RBP15.76■□□□□ 0.11
HMGA1-204ENST00000401473 ZDHHC3Q9NYG2 299 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 RAB21Q9UL25 225 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 PRKAB1Q9Y478 270 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 ZFC3H1O60293 1989 aaKnown RBP15.76■□□□□ 0.11
HMGA1-204ENST00000401473 ARHGAP33O14559 1287 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 KHNYNO15037 678 aaKnown RBP15.76■□□□□ 0.11
HMGA1-204ENST00000401473 SGTAO43765 313 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 SRP54P61011 504 aaKnown RBP15.76■□□□□ 0.11
HMGA1-204ENST00000401473 FRG1Q14331 258 aaKnown RBP15.76■□□□□ 0.11
HMGA1-204ENST00000401473 CSRP2Q16527 193 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 ZNF470Q6ECI4 717 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 CYS1Q717R9 158 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 RD3Q7Z3Z2 195 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 RABEPKQ7Z6M1 372 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 ZNF547Q8IVP9 402 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms