RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 S100A14Q9HCY8 104 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 ASNA1O43681 348 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 CCNYL3P0C7X3 344 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 CCNA2P20248 432 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 SH3D19Q5HYK7 790 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 GLYATQ6IB77 296 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 ZDHHC24Q6UX98 284 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 AGMOQ6ZNB7 445 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 PHYKPLQ8IUZ5 450 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 PLD4Q96BZ4 506 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 HBEGFQ99075 208 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 SLC28A3Q9HAS3 691 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 RAB23Q9ULC3 237 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 OGDHLQ9ULD0 1010 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 ZNF536O15090 1300 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 FZD9O00144 591 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 RNASEH2AO75792 299 aaKnown RBP18.07■□□□□ 0.48
COL18A1-204ENST00000400337 TCF4P15884 667 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 SF1Q15637 639 aaKnown RBP18.07■□□□□ 0.48
COL18A1-204ENST00000400337 TBC1D21Q8IYX1 336 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 BRSK1Q8TDC3 778 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 LENG8Q96PV6 779 aaPredicted RBP18.07■□□□□ 0.48
COL18A1-204ENST00000400337 AIF1LQ9BQI0 150 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 A0A1W2PQ67 120 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 CAPN15O75808 1086 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 KELP23276 732 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 RPL4P36578 427 aaKnown RBP18.07■□□□□ 0.48
COL18A1-204ENST00000400337 B3GALT6Q96L58 329 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 G3V2T6 193 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 WFS1O76024 890 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 POP4O95707 220 aaKnown RBP18.06■□□□□ 0.48
COL18A1-204ENST00000400337 TBX18O95935 607 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 PRNPP04156 253 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 BMP7P18075 431 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 CHRNA4P43681 627 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 ADARP55265 1226 aaKnown RBP18.06■□□□□ 0.48
COL18A1-204ENST00000400337 TAS2R39P59534 338 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 CRHR2Q13324 411 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 BANPQ8N9N5 519 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 ERGIC3Q9Y282 383 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 CA12O43570 354 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 POU5F1Q01860 360 aaKnown RBP18.06■□□□□ 0.48
COL18A1-204ENST00000400337 TXNRD3NBQ6F5E7 133 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 FAM180AQ6UWF9 173 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 FUBP3Q96I24 572 aaKnown RBP eCLIP18.06■□□□□ 0.48
COL18A1-204ENST00000400337 FBXL18Q96ME1 805 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 PPEF2O14830 753 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 NRLP54845 237 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 ITGADQ13349 1161 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 ATXN7L2Q5T6C5 722 aaPredicted RBP18.06■□□□□ 0.48
COL18A1-204ENST00000400337 DCAF12L1Q5VU92 463 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 AMIGO3Q86WK7 504 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 CPNE9Q8IYJ1 553 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 SIDT2Q8NBJ9 832 aaKnown RBP18.06■□□□□ 0.48
COL18A1-204ENST00000400337 SCLYQ96I15 445 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 MIOSQ9NXC5 875 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 ZNF624Q9P2J8 865 aaPredicted RBP18.06■□□□□ 0.48
COL18A1-204ENST00000400337 IRAK2O43187 625 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 PEX6Q13608 980 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 CCNYL2Q5T2Q4 361 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 SLC35B2Q8TB61 432 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 NOL6Q9H6R4 1146 aaKnown RBP18.06■□□□□ 0.48
COL18A1-204ENST00000400337 CERS4Q9HA82 394 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 MAT2BQ9NZL9 334 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 EHD3Q9NZN3 535 aa18.06■□□□□ 0.48
COL18A1-204ENST00000400337 DYTNA2CJ06 578 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 UGT1A9O60656 530 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 SHOX2O60902 331 aaPredicted RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 JAK1P23458 1154 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 DCTN2Q13561 401 aaKnown RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 RFX4Q33E94 735 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 UGT1A7Q9HAW7 530 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 UGT1A10Q9HAW8 530 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 UGT1A8Q9HAW9 530 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 EIF2B2P49770 351 aaKnown RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 ACLYP53396 1101 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 SLC39A4Q6P5W5 647 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 CFAP206Q8IYR0 622 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 FAM47BQ8NA70 645 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 TXNRD2Q9NNW7 524 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 SAMD4AQ9UPU9 718 aaKnown RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 PARP4Q9UKK3 1724 aaKnown RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 SLC7A4O43246 635 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 GTF2H2Q13888 395 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 LACTB2Q53H82 288 aaPredicted RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 C9orf64Q5T6V5 341 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 GTF2H2CQ6P1K8 395 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 UBASH3BQ8TF42 649 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 BTBD9Q96Q07 612 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 CIB1Q99828 191 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 TCF25Q9BQ70 676 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 CLK4Q9HAZ1 481 aaKnown RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 DUS2Q9NX74 493 aaKnown RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 ZMYND8Q9ULU4 1186 aaPredicted RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 CORO1CQ9ULV4 474 aaPredicted RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 TRBV23OR9-2A0A075B6M9 112 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 PRG2P13727 222 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 LPGAT1Q92604 370 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 LMO7Q8WWI1 1683 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 GRIN2DO15399 1336 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms