RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 HM13Q8TCT9 377 aa11.3□□□□□ -0.6
C4orf3-201ENST00000399075 BIRC8Q96P09 236 aa11.3□□□□□ -0.6
C4orf3-201ENST00000399075 CIB1Q99828 191 aa11.3□□□□□ -0.6
C4orf3-201ENST00000399075 AGPAT4Q9NRZ5 378 aa11.3□□□□□ -0.6
C4orf3-201ENST00000399075 PCTPQ9UKL6 214 aa11.3□□□□□ -0.6
C4orf3-201ENST00000399075 IKZF3Q9UKT9 509 aa11.3□□□□□ -0.6
C4orf3-201ENST00000399075 PCDHA9Q9Y5H5 950 aa11.3□□□□□ -0.6
C4orf3-201ENST00000399075 COMMD10Q9Y6G5 202 aa11.3□□□□□ -0.6
C4orf3-201ENST00000399075 ILVBLA1L0T0 632 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 GRXCR2A6NFK2 248 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 SLC38A8A6NNN8 435 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 VPS26AO75436 327 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 CRCPO75575 148 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 TIPRLO75663 272 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 CHEK2O96017 543 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 PRLP01236 227 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 CYBBP04839 570 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 LINC00032P0C843 101 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 ATP6V1B1P15313 513 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 TTPAP49638 278 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 CLCN4P51793 760 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 TUBA4AP68366 448 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 PRKCQQ04759 706 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 EML3Q32P44 896 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 CCDC92Q53HC0 331 aaPredicted RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 CHST9Q7L1S5 443 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 AMIGO2Q86SJ2 522 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 PTRH1Q86Y79 214 aaKnown RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 CFAP52Q8N1V2 620 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 MDGA1Q8NFP4 955 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 ZFP28Q8NHY6 868 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 PPWD1Q96BP3 646 aaKnown RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 LRCH3Q96II8 777 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 GPR21Q99679 349 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 MARCH5Q9NX47 278 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 DUS2Q9NX74 493 aaKnown RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 GIMAP2Q9UG22 337 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 FAM50BQ9Y247 325 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 H3BNH8 94 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 AKAP10O43572 662 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 EEDO75530 441 aaKnown RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 TSPAN12O95859 305 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 PRSS56P0CW18 603 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 PKMP14618 531 aaKnown RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 LPOP22079 712 aaPredicted RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 IL10P22301 178 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 PSMA4P25789 261 aaKnown RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 ATP5C1P36542 298 aaKnown RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 RGRP47804 291 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 ADARP55265 1226 aaKnown RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 ARPP19P56211 112 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 PDCD4Q53EL6 469 aaKnown RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 PITRM1Q5JRX3 1037 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 TBCELQ5QJ74 424 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 CAMK1DQ8IU85 385 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 SNRNP27Q8WVK2 155 aaKnown RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 OVCA2Q8WZ82 227 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 TFAP2CQ92754 450 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 NMD3Q96D46 503 aaKnown RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 RMDN1Q96DB5 314 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 MYRFLQ96LU7 910 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 NSMCE3Q96MG7 304 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 TMEM79Q9BSE2 394 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 SEMA4BQ9NPR2 832 aaPredicted RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 SCUBE2Q9NQ36 999 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 BTRCQ9Y297 605 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 MYRFQ9Y2G1 1151 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 ZFP37Q9Y6Q3 630 aaPredicted RBP11.29□□□□□ -0.6
C4orf3-201ENST00000399075 DNAH12Q6ZR08 3092 aa11.29□□□□□ -0.6
C4orf3-201ENST00000399075 H7C0S8 307 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 CDC7O00311 574 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 NPPAP01160 153 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 FCGR1AP12314 374 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 TM4SF4P48230 202 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 ALDH3B2P48448 385 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 NME5P56597 212 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 PTPRNQ16849 979 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 TMEM259Q4ZIN3 620 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 AARS2Q5JTZ9 985 aaKnown RBP11.28□□□□□ -0.6
C4orf3-201ENST00000399075 RSPO2Q6UXX9 243 aaPredicted RBP11.28□□□□□ -0.6
C4orf3-201ENST00000399075 PDZD8Q8NEN9 1154 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 OR56A4Q8NGH8 313 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 TMEM125Q96AQ2 219 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 PLD4Q96BZ4 506 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 CWH43Q9H720 699 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 GMPR2Q9P2T1 348 aaKnown RBP11.28□□□□□ -0.6
C4orf3-201ENST00000399075 TRMT6Q9UJA5 497 aaKnown RBP11.28□□□□□ -0.6
C4orf3-201ENST00000399075 A0A1B0GTL3 188 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 NPEPPSL1A6NEC2 478 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 BTN3A1O00481 513 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 ARPC2O15144 300 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 ZFP36L2P47974 494 aaKnown RBP11.28□□□□□ -0.6
C4orf3-201ENST00000399075 EEFSECP57772 596 aaKnown RBP11.28□□□□□ -0.6
C4orf3-201ENST00000399075 KCNK10P57789 538 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 KRT80Q6KB66 452 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 FUT10Q6P4F1 479 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 ANKS3Q6ZW76 656 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 SYVN1Q86TM6 617 aa11.28□□□□□ -0.6
C4orf3-201ENST00000399075 ADGRG5Q8IZF4 528 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms