RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IGKV6-21A0A0C4DH24 114 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 HBP1O60381 514 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 CLASP2O75122 1294 aaKnown RBP9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 CNTN5O94779 1100 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 CDK14O94921 469 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 DLGAP3O95886 979 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 ITGB6P18564 788 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 PSMB9P28065 219 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 PSMD8P48556 350 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 CDKN2DP55273 166 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 NRG1Q02297 640 aaPredicted RBP9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 ZNF846Q147U1 533 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 UNC50Q53HI1 259 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 HECTD2Q5U5R9 776 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 XAF1Q6GPH4 301 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 GALNT5Q7Z7M9 940 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 C8orf59Q8N0T1 100 aaPredicted RBP9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 PACRGLQ8N7B6 248 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 BEST2Q8NFU1 509 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 OR7A2PQ8NGA2 310 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 ZNF419Q96HQ0 510 aaPredicted RBP9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 FEM1CQ96JP0 617 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 NSMCE2Q96MF7 247 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 NPY6RQ99463 290 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 DOK1Q99704 481 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 HOPXQ9BPY8 73 aaPredicted RBP9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 CD320Q9NPF0 282 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 NSMCE4AQ9NXX6 385 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 UTS2RQ9UKP6 389 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 SARDHQ9UL12 918 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 TMED5Q9Y3A6 229 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 SLC30A1Q9Y6M5 507 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 ANKRD31Q8N7Z5 1873 aa9.82□□□□□ -0.84
PTCHD4-202ENST00000398738 TREHO43280 583 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 HS6ST1O60243 411 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 TSPAN1O60635 241 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 THRBP10828 461 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 MTHFRP42898 656 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 ACADSBP45954 432 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 MAP2K4P45985 399 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 GSSP48637 474 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 ARSFP54793 590 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 TMBIM6P55061 237 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 ADAM17P78536 824 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 CELF3Q5SZQ8 465 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 TAF2Q6P1X5 1199 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 TMEM207Q6UWW9 146 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 PAGE2Q7Z2X7 111 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 THAP5Q7Z6K1 395 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 CLYBLQ8N0X4 340 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 ATPAF2Q8N5M1 289 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 TERB1Q8NA31 727 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 ADAMTS16Q8TE57 1224 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 SLC22A17Q8WUG5 538 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 EVPLQ92817 2033 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 ZUFSPQ96AP4 578 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 PTERQ96BW5 349 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 ROPN1LQ96C74 230 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 ZNF347Q96SE7 839 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 KLF16Q9BXK1 252 aaPredicted RBP9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 ALOXE3Q9BYJ1 711 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 VWA7Q9Y334 891 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 A0A087X1B8 175 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 UBA6A0AVT1 1052 aaPredicted RBP9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 CCDC154A6NI56 674 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 ZNF487B1APH4 448 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 AZIN1O14977 448 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 RECQL4O94761 1208 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 C22orf31O95567 290 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 CYP2C9P11712 490 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 PRDX3P30048 256 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 PIGAP37287 484 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 SLC19A1P41440 591 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 ARCN1P48444 511 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 OXA1LQ15070 435 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 NOL9Q5SY16 702 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 ZNF697Q5TEC3 545 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 C9orf57Q5W0N0 161 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 GPRIN1Q7Z2K8 1008 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 SPRED1Q7Z699 444 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 FAM86B1Q8N7N1 296 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 B3GALNT2Q8NCR0 500 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 CNIH3Q8TBE1 160 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 C12orf42Q96LP6 360 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 PDGFDQ9GZP0 370 aaPredicted RBP9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 NDFIP2Q9NV92 336 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 TRHDEQ9UKU6 1024 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 FAM50BQ9Y247 325 aa9.81□□□□□ -0.84
PTCHD4-202ENST00000398738 TRIM64CA6NLI5 447 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 SUPT3HB4E1H0 165 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 ENPP3O14638 875 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 PFDN6O15212 129 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 RBP1P09455 135 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 LBPP18428 481 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 PAMP19021 973 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 NCS1P62166 190 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 IL5RAQ01344 420 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 POU4F1Q01851 419 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 CACNB2Q08289 660 aaPredicted RBP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 BNIP2Q12982 314 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms