RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PDE1CQ14123 709 aaPredicted RBP20.98■□□□□ 0.95
CPNE1-204ENST00000397443 KHDC1Q4VXA5 237 aaKnown RBP20.98■□□□□ 0.95
CPNE1-204ENST00000397443 TMEM259Q4ZIN3 620 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 CWF19L1Q69YN2 538 aaKnown RBP20.98■□□□□ 0.95
CPNE1-204ENST00000397443 FAM76AQ8TAV0 307 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 MDM1Q8TC05 714 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 MGARPQ8TDB4 240 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 BTN2A2Q8WVV5 523 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 GLYATL1Q969I3 302 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 TOE1Q96GM8 510 aaKnown RBP20.98■□□□□ 0.95
CPNE1-204ENST00000397443 PKNOX2Q96KN3 472 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 LENG8Q96PV6 779 aaPredicted RBP20.98■□□□□ 0.95
CPNE1-204ENST00000397443 AARSD1Q9BTE6 412 aaKnown RBP20.98■□□□□ 0.95
CPNE1-204ENST00000397443 UNKQ9C0B0 810 aaKnown RBP20.98■□□□□ 0.95
CPNE1-204ENST00000397443 MLXIPLQ9NP71 852 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 OGFRQ9NZT2 677 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 PIKFYVEQ9Y2I7 2098 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 ZDBF2Q9HCK1 2354 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 A0A096LPK6 155 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 TMEM120BA0PK00 339 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 LRRC72A6NJI9 287 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 APBB3O95704 486 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 PKMP14618 531 aaKnown RBP20.98■□□□□ 0.95
CPNE1-204ENST00000397443 RAB10P61026 200 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 POU4F1Q01851 419 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 DNAJC3Q13217 504 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 LRRC14Q15048 493 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 IRF4Q15306 451 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 PTRHD1Q6GMV3 140 aaKnown RBP20.98■□□□□ 0.95
CPNE1-204ENST00000397443 FAM45BPQ6NSW5 357 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 SH2D5Q6ZV89 423 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 ZNF765Q7L2R6 523 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 SPATA6LQ8N4H0 392 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 FAM45AQ8TCE6 357 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 DCUN1D1Q96GG9 259 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 C1QTNF2Q9BXJ5 285 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 ACTL7BQ9Y614 415 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 GON4LQ3T8J9 2241 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 CACNA1IQ9P0X4 2223 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 COPEO14579 308 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 RAD51BO15315 384 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 DCXO43602 365 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 SEMA4FO95754 770 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 C2P06681 752 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 C7P10643 843 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 CHRM3P20309 590 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 CXCL12P48061 93 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 DPTQ07507 201 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 BANPQ8N9N5 519 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 OR2T34Q8NGX1 318 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 P2RY12Q9H244 342 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 SGK2Q9HBY8 427 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 SMOXQ9NWM0 555 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 GALPQ9UBC7 116 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 MBD1Q9UIS9 605 aaPredicted RBP20.97■□□□□ 0.95
CPNE1-204ENST00000397443 TLK1Q9UKI8 766 aa20.97■□□□□ 0.95
CPNE1-204ENST00000397443 E5RI56 91 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 MSH3P20585 1137 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 NSG1P42857 185 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 MPP2Q14168 576 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 INPP5AQ14642 412 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 PNCKQ6P2M8 343 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 PHYKPLQ8IUZ5 450 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 RAVER1Q8IY67 606 aaKnown RBP20.96■□□□□ 0.95
CPNE1-204ENST00000397443 SCG3Q8WXD2 468 aaKnown RBP20.96■□□□□ 0.95
CPNE1-204ENST00000397443 SGF29Q96ES7 293 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 CNOT6Q9ULM6 557 aaKnown RBP20.96■□□□□ 0.95
CPNE1-204ENST00000397443 TRIM16O95361 564 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 ESR1P03372 595 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 SLC35E2BP0CK96 405 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 RPA3P35244 121 aaPredicted RBP20.96■□□□□ 0.95
CPNE1-204ENST00000397443 TIAL1Q01085 375 aaKnown RBP eCLIP20.96■□□□□ 0.951e-6■■■■■ 29.1
CPNE1-204ENST00000397443 SLC18A2Q05940 514 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 CDHR3Q6ZTQ4 885 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 GPR174Q9BXC1 333 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 C6orf106Q9H6K1 298 aaPredicted RBP20.96■□□□□ 0.95
CPNE1-204ENST00000397443 GPAMQ9HCL2 828 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 ZNF358Q9NW07 568 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 GNPTGQ9UJJ9 305 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 CORO1CQ9ULV4 474 aaPredicted RBP20.96■□□□□ 0.95
CPNE1-204ENST00000397443 OR1A2Q9Y585 309 aa20.96■□□□□ 0.95
CPNE1-204ENST00000397443 OR2AG2A6NM03 316 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 FDXRP22570 491 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 MAGEA12P43365 314 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 PDAP1Q13442 181 aaKnown RBP20.95■□□□□ 0.94
CPNE1-204ENST00000397443 ITIH4Q14624 930 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 TAF1BQ53T94 588 aaPredicted RBP20.95■□□□□ 0.94
CPNE1-204ENST00000397443 DOK6Q6PKX4 331 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 NAPRTQ6XQN6 538 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 HEATR4Q86WZ0 1026 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 SIDT2Q8NBJ9 832 aaKnown RBP20.95■□□□□ 0.94
CPNE1-204ENST00000397443 TP53I13Q8NBR0 393 aaPredicted RBP20.95■□□□□ 0.94
CPNE1-204ENST00000397443 DDHD1Q8NEL9 900 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 LKAAEAR1Q8TD35 194 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 DTX3LQ8TDB6 740 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 ISL2Q96A47 359 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 TSPAN17Q96FV3 270 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 APOPT1Q96IL0 206 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 VPS35Q96QK1 796 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 GPR21Q99679 349 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms