RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 LYSMD3Q7Z3D4 306 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 TSPAN33Q86UF1 283 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 DENND6AQ8IWF6 608 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 TMEM151AQ8N4L1 468 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 OR13J1Q8NGT2 312 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 OR14C36Q8NHC7 312 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 PIWIL2Q8TC59 973 aaKnown RBP14.81□□□□□ -0.04
CAPN3-207ENST00000397200 PTCD3Q96EY7 689 aaKnown RBP14.81□□□□□ -0.04
CAPN3-207ENST00000397200 TUBB6Q9BUF5 446 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 ITM2CQ9NQX7 267 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 FBXO5Q9UKT4 447 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 RIMKLBQ9ULI2 386 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 TRIM33Q9UPN9 1127 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 ITM2BQ9Y287 266 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 FADS3Q9Y5Q0 445 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 ARL5AQ9Y689 179 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 A0A0U1RQS6 177 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 FAM95CA0A1B0GW59 222 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 CCDC78A2IDD5 438 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 TNFRSF10AO00220 468 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 AURKAO14965 403 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 SPINT1O43278 529 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 ITM2AO43736 263 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 AP1G1O43747 822 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 CLDN7O95471 211 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 ELFN1P0C7U0 828 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 RALBP11234 206 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 LHCGRP22888 699 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 RASSF2P50749 326 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 PRKAA2P54646 552 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 ILF2Q12905 390 aaKnown RBP14.8□□□□□ -0.04
CAPN3-207ENST00000397200 THOC5Q13769 683 aaKnown RBP14.8□□□□□ -0.04
CAPN3-207ENST00000397200 CDKN3Q16667 212 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 ATG14Q6ZNE5 492 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 FAM124AQ86V42 546 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 PARP9Q8IXQ6 854 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 LMNTD2Q8IXW0 634 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 CENPLQ8N0S6 344 aaPredicted RBP14.8□□□□□ -0.04
CAPN3-207ENST00000397200 TTC30BQ8N4P2 665 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 CALML6Q8TD86 181 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 UTP4Q969X6 686 aaKnown RBP14.8□□□□□ -0.04
CAPN3-207ENST00000397200 FAM131CQ96AQ9 280 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 TPSD1Q9BZJ3 242 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 NMRAL1Q9HBL8 299 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 USP36Q9P275 1121 aaKnown RBP14.8□□□□□ -0.04
CAPN3-207ENST00000397200 EBF1Q9UH73 591 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 SLC39A10Q9ULF5 831 aa14.8□□□□□ -0.04
CAPN3-207ENST00000397200 TMEM114B3SHH9 223 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 TARM1B6A8C7 271 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 K7ESF4 209 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 FCHO1O14526 889 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 TSPAN6O43657 245 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 PLRG1O43660 514 aaKnown RBP14.79□□□□□ -0.04
CAPN3-207ENST00000397200 LDB2O43679 373 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 ZNF217O75362 1048 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 LPOP22079 712 aaPredicted RBP14.79□□□□□ -0.04
CAPN3-207ENST00000397200 CRABP2P29373 138 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 ARRB2P32121 409 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 LEPRP48357 1165 aaKnown RBP14.79□□□□□ -0.04
CAPN3-207ENST00000397200 PXNP49023 591 aaPredicted RBP14.79□□□□□ -0.04
CAPN3-207ENST00000397200 ADPRHP54922 357 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 TAS2R38P59533 333 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 RAB10P61026 200 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 ABCE1P61221 599 aaKnown RBP14.79□□□□□ -0.04
CAPN3-207ENST00000397200 RALGDSQ12967 914 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 CTBP1Q13363 440 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 USP10Q14694 798 aaKnown RBP14.79□□□□□ -0.04
CAPN3-207ENST00000397200 TMEM52BQ4KMG9 183 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 ZNF470Q6ECI4 717 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 NEPROQ6NW34 567 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 BMP8AQ7Z5Y6 402 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 KIF2BQ8N4N8 673 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 FBXL6Q8N531 539 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 TMEM105Q8N8V8 129 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 PPP1R14CQ8TAE6 165 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 GABPB2Q8TAK5 448 aaPredicted RBP14.79□□□□□ -0.04
CAPN3-207ENST00000397200 CXorf40AQ8TE69 158 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 WRAP53Q9BUR4 548 aaKnown RBP14.79□□□□□ -0.04
CAPN3-207ENST00000397200 FAM96AQ9H5X1 160 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 EPHX3Q9H6B9 360 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 CD93Q9NPY3 652 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 FBXO6Q9NRD1 293 aaPredicted RBP14.79□□□□□ -0.04
CAPN3-207ENST00000397200 HAO1Q9UJM8 370 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 CYP8B1Q9UNU6 501 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 PKP3Q9Y446 797 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 KCTD3Q9Y597 815 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 ZNF106Q9H2Y7 1883 aaKnown RBP14.79□□□□□ -0.04
CAPN3-207ENST00000397200 SCN8AQ9UQD0 1980 aa14.79□□□□□ -0.04
CAPN3-207ENST00000397200 H0Y858 1186 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 STX7O15400 261 aaKnown RBP14.78□□□□□ -0.04
CAPN3-207ENST00000397200 LAMTOR5O43504 91 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 BUD23O43709 281 aaKnown RBP14.78□□□□□ -0.04
CAPN3-207ENST00000397200 LYPLA1O75608 230 aaPredicted RBP14.78□□□□□ -0.04
CAPN3-207ENST00000397200 PCDH8O95206 1070 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 CBX6O95503 412 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 SBK3P0C264 359 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 OXTRP30559 389 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 HMGCLP35914 325 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 AQP5P55064 265 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 POU4F1Q01851 419 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms