RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 UBE3AQ05086 875 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 PPP1R3AQ16821 1122 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 MYLK3Q32MK0 819 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 BNC2Q6ZN30 1099 aaPredicted RBP14.82□□□□□ -0.04
CBX3-202ENST00000396386 LRRC74BQ6ZQY2 392 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 GK5Q6ZS86 529 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 USP45Q70EL2 814 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 ZSWIM9Q86XI8 627 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 TMEM25Q86YD3 366 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 GPSM1Q86YR5 675 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 DSELQ8IZU8 1212 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 SPPL3Q8TCT6 385 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 TRPC4APQ8TEL6 797 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 TWIST2Q8WVJ9 160 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 CCDC124Q96CT7 223 aaKnown RBP14.82□□□□□ -0.04
CBX3-202ENST00000396386 LYSMD1Q96S90 227 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 SERPINI1Q99574 410 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 BBS2Q9BXC9 721 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 EFCAB1Q9HAE3 211 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 TDP1Q9NUW8 608 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 NUDT4Q9NZJ9 180 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 CRLS1Q9UJA2 301 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 DHRS7Q9Y394 339 aa14.82□□□□□ -0.04
CBX3-202ENST00000396386 NUP210Q8TEM1 1887 aaPredicted RBP14.82□□□□□ -0.04
CBX3-202ENST00000396386 NOTCH4Q99466 2003 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 NCF1BA6NI72 391 aaPredicted RBP14.81□□□□□ -0.04
CBX3-202ENST00000396386 NCF1CA8MVU1 366 aaPredicted RBP14.81□□□□□ -0.04
CBX3-202ENST00000396386 XYLBO75191 536 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 NCF1P14598 390 aaPredicted RBP14.81□□□□□ -0.04
CBX3-202ENST00000396386 ARSAP15289 507 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 BPIP17213 487 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 ACRV1P26436 265 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 FASTKQ14296 549 aaKnown RBP14.81□□□□□ -0.04
CBX3-202ENST00000396386 TAF11Q15544 211 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 SLC5A9Q2M3M2 681 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 UGT3A2Q3SY77 523 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 ASTLQ6HA08 431 aaPredicted RBP14.81□□□□□ -0.04
CBX3-202ENST00000396386 AAGABQ6PD74 315 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 ELMSAN1Q6PJG2 1045 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 CYHR1Q6ZMK1 362 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 PGAM4Q8N0Y7 254 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 CBARPQ8N350 705 aaPredicted RBP14.81□□□□□ -0.04
CBX3-202ENST00000396386 ZNF483Q8TF39 744 aaPredicted RBP14.81□□□□□ -0.04
CBX3-202ENST00000396386 ECHDC3Q96DC8 303 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 RSRC1Q96IZ7 334 aaKnown RBP14.81□□□□□ -0.04
CBX3-202ENST00000396386 LBHD1Q9BQE6 289 aaPredicted RBP14.81□□□□□ -0.04
CBX3-202ENST00000396386 ZDHHC6Q9H6R6 413 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 IL26Q9NPH9 171 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 CD274Q9NZQ7 290 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 DNAJC15Q9Y5T4 150 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 WASF2Q9Y6W5 498 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 MYOFQ9NZM1 2061 aa14.81□□□□□ -0.04
CBX3-202ENST00000396386 NPIPB15A6NHN6 443 aaPredicted RBP14.8□□□□□ -0.04
CBX3-202ENST00000396386 IQCF5A8MTL0 148 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 PSMD12O00232 456 aaPredicted RBP14.8□□□□□ -0.04
CBX3-202ENST00000396386 BNIP3LO60238 219 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 CRCPO75575 148 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 HNRNPA1P09651 372 aaKnown RBP eCLIP14.8□□□□□ -0.04
CBX3-202ENST00000396386 CCNHP51946 323 aaPredicted RBP14.8□□□□□ -0.04
CBX3-202ENST00000396386 STX1BP61266 288 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 ART3Q13508 389 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 DMC1Q14565 340 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 ZNF77Q15935 545 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 GPR33Q49SQ1 333 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 CARD16Q5EG05 197 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 TLDC1Q6P9B6 456 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 FRA10AC1Q70Z53 315 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 LARP4Q71RC2 724 aaKnown RBP eCLIP14.8□□□□□ -0.045e-13■■□□□ 14.4
CBX3-202ENST00000396386 EFL1Q7Z2Z2 1120 aaKnown RBP14.8□□□□□ -0.04
CBX3-202ENST00000396386 ADAMTSL2Q86TH1 951 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 TSPAN33Q86UF1 283 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 HPS6Q86YV9 775 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 MICAL1Q8TDZ2 1067 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 IRF7Q92985 503 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 PDLIM5Q96HC4 596 aaKnown RBP14.8□□□□□ -0.04
CBX3-202ENST00000396386 CPEB1Q9BZB8 566 aaKnown RBP14.8□□□□□ -0.04
CBX3-202ENST00000396386 SUV39H2Q9H5I1 410 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 SEMA4BQ9NPR2 832 aaPredicted RBP14.8□□□□□ -0.04
CBX3-202ENST00000396386 SPHK2Q9NRA0 654 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 TBC1D14Q9P2M4 693 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 PCTPQ9UKL6 214 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 POMPQ9Y244 141 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 PPP6CO00743 305 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 PIP5K1BO14986 540 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 NVLO15381 856 aaKnown RBP14.8□□□□□ -0.04
CBX3-202ENST00000396386 MLYCDO95822 493 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 ENO3P13929 434 aaPredicted RBP14.8□□□□□ -0.04
CBX3-202ENST00000396386 ANPEPP15144 967 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 RGS4P49798 205 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 PTPN5P54829 565 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 CDC16Q13042 620 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 CCNIQ14094 377 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 PTK2BQ14289 1009 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 CHRNA6Q15825 494 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 MUM1Q2TAK8 710 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 TCHHL1Q5QJ38 904 aaPredicted RBP14.8□□□□□ -0.04
CBX3-202ENST00000396386 TPRG1Q6ZUI0 275 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 DDIASQ8IXT1 998 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 PHOSPHO2Q8TCD6 241 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 HERVK_113Q902F9 699 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms