RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SLC4A1P02730 911 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 PYGMP11217 842 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 SFTPCP11686 197 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 ACP5P13686 325 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 BRAFP15056 766 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 UGT1A6P19224 532 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 UGT1A1P22309 533 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 UGT1A4P22310 534 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 NFKBIAP25963 317 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 RBL1P28749 1068 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 CTNNA1P35221 906 aaKnown RBP8.75□□□□□ -1.01
ATG4A-205ENST00000394892 ADRA1AP35348 466 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 UGT1A3P35503 534 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 FASLGP48023 281 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 CSRP3P50461 194 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 LIMK2P53671 638 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 UBE2IP63279 158 aaKnown RBP8.75□□□□□ -1.01
ATG4A-205ENST00000394892 TFDP2Q14188 446 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 PPP2R5EQ16537 467 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 ATP13A5Q4VNC0 1218 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 TFDP3Q5H9I0 405 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 DTX1Q86Y01 620 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 RCOR2Q8IZ40 523 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 NDUFAF2Q8N183 169 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 SLC25A41Q8N5S1 370 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 TRAM1L1Q8N609 369 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 NAT14Q8WUY8 206 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 USP7Q93009 1102 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 GLYATL1Q969I3 302 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 CCDC74BQ96LY2 380 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 TMEM74Q96NL1 305 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 FCRL5Q96RD9 977 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 CCNL2Q96S94 520 aaPredicted RBP8.75□□□□□ -1.01
ATG4A-205ENST00000394892 SPATA16Q9BXB7 569 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 ADGRE3Q9BY15 652 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 CDH19Q9H159 772 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 CARD9Q9H257 536 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 UGT1A7Q9HAW7 530 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 UGT1A10Q9HAW8 530 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 UGT1A8Q9HAW9 530 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 OCIAD1Q9NX40 245 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 PKD2L2Q9NZM6 624 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 OGFRQ9NZT2 677 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 IL17CQ9P0M4 197 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 FAM153AQ9UHL3 310 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 DNPEPQ9ULA0 475 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 KCTD3Q9Y597 815 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 PCDHA3Q9Y5H8 950 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 AHCTF1Q8WYP5 2266 aa8.75□□□□□ -1.01
ATG4A-205ENST00000394892 TCRBV7S2A1N4TA0A589 114 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 BTNL10A8MVZ5 291 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 TMX2-CTNND1H3BSU7 103 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 PJA2O43164 708 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 GRID2O43424 1007 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 SNX2O60749 519 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 PYGLP06737 847 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 THRAP10827 490 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 CA4P22748 312 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 CTNNA2P26232 953 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 SLC19A1P41440 591 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 GPR3P46089 330 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 CLCNKAP51800 687 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 CTSCP53634 463 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 OTUD4Q01804 1114 aaKnown RBP8.74□□□□□ -1.01
ATG4A-205ENST00000394892 EIF3IQ13347 325 aaKnown RBP8.74□□□□□ -1.01
ATG4A-205ENST00000394892 NFATC2Q13469 925 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 LRP8Q14114 963 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 SLC1A5Q15758 541 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 CHRNA6Q15825 494 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 PHF19Q5T6S3 580 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 KIAA1614Q5VZ46 1190 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 DENND5AQ6IQ26 1287 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 CRTC3Q6UUV7 619 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 ARHGAP22Q7Z5H3 698 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 DAAM2Q86T65 1068 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 PIM3Q86V86 326 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 KLHDC8BQ8IXV7 354 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 BMPERQ8N8U9 685 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 ACTL9Q8TC94 416 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 CCHCR1Q8TD31 782 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 HTR3CQ8WXA8 447 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 PLEKHG4BQ96PX9 1271 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 TBC1D10AQ9BXI6 508 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 GPR63Q9BZJ6 419 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 SPRY4Q9C004 299 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 STRADBQ9C0K7 418 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 TRIM39Q9HCM9 518 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 SARS2Q9NP81 518 aaKnown RBP8.74□□□□□ -1.01
ATG4A-205ENST00000394892 ZNF624Q9P2J8 865 aaPredicted RBP8.74□□□□□ -1.01
ATG4A-205ENST00000394892 SLC30A1Q9Y6M5 507 aa8.74□□□□□ -1.01
ATG4A-205ENST00000394892 APOC4-APOC2K7ER74 178 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 DDX3YO15523 660 aaKnown RBP8.73□□□□□ -1.01
ATG4A-205ENST00000394892 SGTAO43765 313 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 SLC25A14O95258 325 aaPredicted RBP8.73□□□□□ -1.01
ATG4A-205ENST00000394892 EPOP01588 193 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 APOC2P02655 101 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 ZNF7P17097 686 aaPredicted RBP8.73□□□□□ -1.01
ATG4A-205ENST00000394892 PTPN7P35236 360 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 CYLC1P35663 651 aaPredicted RBP8.73□□□□□ -1.01
ATG4A-205ENST00000394892 HMGCLP35914 325 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms