RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 C8orf4Q9NR00 106 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 AIG1Q9NVV5 245 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 SMPD3Q9NY59 655 aaPredicted RBP18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 USP22Q9UPT9 525 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 VPS4BO75351 444 aa18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 PIRTP0C851 137 aa18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 KCNK10P57789 538 aa18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 RAB39AQ14964 217 aa18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 FUT11Q495W5 492 aa18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 SETMARQ53H47 684 aaPredicted RBP18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 SPATA19Q7Z5L4 167 aa18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 PATL1Q86TB9 770 aaKnown RBP18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 FBXO39Q8N4B4 442 aa18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 TSPEARQ8WU66 669 aa18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 KIAA1191Q96A73 305 aa18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 RPF2Q9H7B2 306 aaKnown RBP18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 CATSPERZQ9NTU4 200 aa18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 ANAPC2Q9UJX6 822 aa18.21■□□□□ 0.51
PCDHA1-202ENST00000394633 H3BMQ9 156 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 MUSKO15146 869 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 PQBP1O60828 265 aaKnown RBP18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 BAIAP3O94812 1187 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 CYBBP04839 570 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 OGNP20774 298 aaKnown RBP18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 CES1P23141 567 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 STC1P52823 247 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 PAQR3Q6TCH7 311 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 KIAA2013Q8IYS2 634 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 OR4L1Q8NH43 312 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 COG8Q96MW5 612 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 TMEM74Q96NL1 305 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 DOK1Q99704 481 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 SLC30A3Q99726 388 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 SLAMF8Q9P0V8 285 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 RNF112Q9ULX5 631 aa18.21■□□□□ 0.5
PCDHA1-202ENST00000394633 IGLV3-10A0A075B6K4 115 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 SH3PXD2BA1X283 911 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 FOXD2O60548 495 aaPredicted RBP18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 ECI2O75521 394 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 EEDO75530 441 aaKnown RBP18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 CRCPO75575 148 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 SNAP29O95721 258 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 MT-ND1P03886 318 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 RPS17P08708 135 aaKnown RBP18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 PRDX3P30048 256 aaKnown RBP18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 RPS9P46781 194 aaKnown RBP18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 UFM1P61960 85 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 ILF2Q12905 390 aaKnown RBP18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 GPNMBQ14956 572 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 C16orf72Q14CZ0 275 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 GPR107Q5VW38 600 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 MAGEE2Q8TD90 523 aaPredicted RBP18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 LINC01599Q8WXQ3 324 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 PEX13Q92968 403 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 PLEKHG4BQ96PX9 1271 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 POLR1BQ9H9Y6 1135 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 MED16Q9Y2X0 877 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 SCN5AQ14524 2016 aa18.2■□□□□ 0.5
PCDHA1-202ENST00000394633 GIPC1O14908 333 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 SNAP91O60641 907 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 RHOBTB1O94844 696 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 FGF1P05230 155 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 HLA-DPA1P20036 260 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 DCKP27707 260 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 MRPL19P49406 292 aaKnown RBP18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 GPR15P49685 360 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 IL10RBQ08334 325 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 TUSC3Q13454 348 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 TYSND1Q2T9J0 566 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 ANKS6Q68DC2 871 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 USP51Q70EK9 711 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 SYVN1Q86TM6 617 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 RTN4RL1Q86UN2 441 aaPredicted RBP18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 CIR1Q86X95 450 aaPredicted RBP18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 TBC1D21Q8IYX1 336 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 ZNF420Q8TAQ5 688 aaPredicted RBP18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 STAG3L4Q8TBR4 150 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 SUSD3Q96L08 255 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 ZNF599Q96NL3 588 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 DERL2Q9GZP9 239 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 INTS10Q9NVR2 710 aaKnown RBP18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 A0A0U1RQF3 1178 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 UBA6A0AVT1 1052 aaPredicted RBP18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 C1RP00736 705 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 UMPSP11172 480 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 ACVRL1P37023 503 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 EEFSECP57772 596 aaKnown RBP18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 ADARB1P78563 741 aaKnown RBP18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 TSNQ15631 228 aaKnown RBP18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 SLC39A12Q504Y0 691 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 PYCR3Q53H96 274 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 RAP1GAP2Q684P5 730 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 FBXL22Q6P050 247 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 TBPL2Q6SJ96 375 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 SCIMPQ6UWF3 145 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 Q6ZNX1 250 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 TMEM26Q6ZUK4 368 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 MON1AQ86VX9 555 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 COLGALT2Q8IYK4 626 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 LRRC43Q8N309 656 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms