RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 VAC14Q08AM6 782 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 SFSWAPQ12872 951 aaKnown RBP6.91□□□□□ -1.3
RTN4-205ENST00000394609 OVGP1Q12889 678 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 ITGA9Q13797 1035 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 GRM2Q14416 872 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 CHI3L2Q15782 390 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 CARD16Q5EG05 197 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 RALGPS1Q5JS13 557 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 LRRC73Q5JTD7 316 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 ARMC3Q5W041 872 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 CES4AQ5XG92 561 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 ANKRD54Q6NXT1 300 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 KYAT3Q6YP21 454 aaKnown RBP6.91□□□□□ -1.3
RTN4-205ENST00000394609 LRRC74BQ6ZQY2 392 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 C1orf229Q6ZS94 237 aaPredicted RBP6.91□□□□□ -1.3
RTN4-205ENST00000394609 KIAA0408Q6ZU52 694 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 NUDCD3Q8IVD9 361 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 SFTPA1Q8IWL2 248 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 AHI1Q8N157 1196 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 TTC30BQ8N4P2 665 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 ZNF366Q8N895 744 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 OR2A12Q8NGT7 310 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 ISL2Q96A47 359 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 OLFM1Q99784 485 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 BTBD10Q9BSF8 475 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 CATSPERZQ9NTU4 200 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 GDE1Q9NZC3 331 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 CDH7Q9ULB5 785 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 TRIM33Q9UPN9 1127 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 ERVW-1Q9UQF0 538 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 ZNF711Q9Y462 761 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 MTF2Q9Y483 593 aaPredicted RBP6.91□□□□□ -1.3
RTN4-205ENST00000394609 EYSQ5T1H1 3165 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 GBF1Q92538 1859 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 A0A0J9YYE9 177 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 C1orf232A0A0U1RR37 186 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 SMIM31A0A1B0GVY4 71 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 POM121CA8CG34 1229 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 HGSO14964 777 aaPredicted RBP6.9□□□□□ -1.3
RTN4-205ENST00000394609 HOXC11O43248 304 aaPredicted RBP6.9□□□□□ -1.3
RTN4-205ENST00000394609 MAGEC1O60732 1142 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 PAPLNO95428 1278 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 CLDN7O95471 211 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 POP4O95707 220 aaKnown RBP6.9□□□□□ -1.3
RTN4-205ENST00000394609 TRBC1P01850 177 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 BPGMP07738 259 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 CCDC166P0CW27 439 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 FCARP24071 287 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 SERPINA4P29622 427 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 MAPK8P45983 427 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 GRIA4P48058 902 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 CDKN2DP55273 166 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 RAB10P61026 200 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 LSAMPQ13449 338 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 DMC1Q14565 340 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 CCDC6Q16204 474 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 POM121L1PQ3SYA9 428 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 FASTKD1Q53R41 847 aaKnown RBP6.9□□□□□ -1.3
RTN4-205ENST00000394609 ATAT1Q5SQI0 421 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 MRNIPQ6NTE8 343 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 VITQ6UXI7 678 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 LINC00114Q6XXX2 140 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 TMEM184AQ6ZMB5 413 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 ZCCHC23Q6ZST2 131 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 OTOAQ7RTW8 1153 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 CLNKQ7Z7G1 428 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 TSPAN33Q86UF1 283 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 PIM3Q86V86 326 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 PIANPQ8IYJ0 282 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 PHTF2Q8N3S3 785 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.9□□□□□ -1.3
RTN4-205ENST00000394609 ZNF557Q8N988 423 aaPredicted RBP6.9□□□□□ -1.3
RTN4-205ENST00000394609 GABPB2Q8TAK5 448 aaPredicted RBP6.9□□□□□ -1.3
RTN4-205ENST00000394609 KCTD4Q8WVF5 259 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 PEX13Q92968 403 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 GFM2Q969S9 779 aaKnown RBP6.9□□□□□ -1.3
RTN4-205ENST00000394609 NXPE3Q969Y0 559 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 ISG20Q96AZ6 181 aaKnown RBP6.9□□□□□ -1.3
RTN4-205ENST00000394609 ERLEC1Q96DZ1 483 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 MRGPRX3Q96LB0 322 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 MYADMQ96S97 322 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 KXD1Q9BQD3 176 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 FAM83CQ9BQN1 747 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 SPATA16Q9BXB7 569 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 SLC2A11Q9BYW1 496 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 PLA2G2FQ9BZM2 168 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 SUV39H2Q9H5I1 410 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 ZNF576Q9H609 170 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 MAGEE1Q9HCI5 957 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 ZFP14Q9HCL3 533 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 GTSE1Q9NYZ3 720 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 CLEC1BQ9P126 229 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 FBXO10Q9UK96 956 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 RUVBL2Q9Y230 463 aaKnown RBP6.9□□□□□ -1.3
RTN4-205ENST00000394609 ACOT9Q9Y305 439 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 VWA7Q9Y334 891 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 PKP3Q9Y446 797 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 DENND4CQ5VZ89 1909 aa6.9□□□□□ -1.3
RTN4-205ENST00000394609 SPTBN5Q9NRC6 3674 aaKnown RBP6.9□□□□□ -1.31
RTN4-205ENST00000394609 UBA6A0AVT1 1052 aaPredicted RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms