RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 A0A1B0GTL3 188 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 PRORSD1PA6NEY8 169 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 MYO1DO94832 1006 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 KRT75O95678 551 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 RBP1P09455 135 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 ZDHHC11BP0C7U3 371 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 YBX1P67809 324 aaKnown RBP15.44■□□□□ 0.06
PTBP1-204ENST00000394601 SH3BP2P78314 561 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 C5orf22Q49AR2 442 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 REP15Q6BDI9 236 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 DSG4Q86SJ6 1040 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.44■□□□□ 0.06
PTBP1-204ENST00000394601 TBC1D15Q8TC07 691 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 CANT1Q8WVQ1 401 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 ASB9Q96DX5 294 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 CCDC126Q96EE4 140 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 SLC45A3Q96JT2 553 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 SP110Q9HB58 689 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 MOSPD1Q9UJG1 213 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 TRAF6Q9Y4K3 522 aa15.44■□□□□ 0.06
PTBP1-204ENST00000394601 LAMA3Q16787 3333 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 TMEM88BA6NKF7 163 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 CLOCKO15516 846 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 TBC1D4O60343 1298 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 PRAMEF11O60813 436 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 C8BP07358 591 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 PRSS56P0CW18 603 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 ZNF26P17031 533 aaPredicted RBP15.43■□□□□ 0.06
PTBP1-204ENST00000394601 MZF1P28698 734 aaPredicted RBP15.43■□□□□ 0.06
PTBP1-204ENST00000394601 PRKCZQ05513 592 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 SQLEQ14534 574 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 OR4D1Q15615 310 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 SMUG1Q53HV7 270 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 MFSD14CQ5VZR4 134 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 ZFP1Q6P2D0 407 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 OR9I1Q8NGQ6 314 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 RPF2Q9H7B2 306 aaKnown RBP15.43■□□□□ 0.06
PTBP1-204ENST00000394601 FBRSL1Q9HCM7 1045 aaKnown RBP15.43■□□□□ 0.06
PTBP1-204ENST00000394601 SLC52A3Q9NQ40 469 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 A0A087WXM4 84 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 MOXD2PA6NHM9 499 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 HTRA2O43464 458 aaPredicted RBP15.43■□□□□ 0.06
PTBP1-204ENST00000394601 GOT2P00505 430 aaKnown RBP15.43■□□□□ 0.06
PTBP1-204ENST00000394601 PABPC1P11940 636 aaKnown RBP15.43■□□□□ 0.06
PTBP1-204ENST00000394601 SEPHS1P49903 392 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 KPNA2P52292 529 aaKnown RBP15.43■□□□□ 0.06
PTBP1-204ENST00000394601 CLCQ05315 142 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 RGMBQ6NW40 437 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 SCAIQ8N9R8 606 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 TMEM181Q9P2C4 612 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 SUCOQ9UBS9 1254 aaKnown RBP15.43■□□□□ 0.06
PTBP1-204ENST00000394601 CRYL1Q9Y2S2 319 aa15.43■□□□□ 0.06
PTBP1-204ENST00000394601 PSMA3P25788 255 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 FOXA1P55317 472 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 PSME3P61289 254 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 AGKQ53H12 422 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 SLC24A5Q71RS6 500 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 CHERPQ8IWX8 916 aaKnown RBP15.42■□□□□ 0.06
PTBP1-204ENST00000394601 DCP1BQ8IZD4 617 aaKnown RBP15.42■□□□□ 0.06
PTBP1-204ENST00000394601 OR13C4Q8NGS5 318 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 PPP1R14BQ96C90 147 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 DUS3LQ96G46 650 aaKnown RBP15.42■□□□□ 0.06
PTBP1-204ENST00000394601 FAR2Q96K12 515 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 SLC2A11Q9BYW1 496 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 GPR62Q9BZJ7 368 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 DNAJC15Q9Y5T4 150 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 PLXNA4Q9HCM2 1894 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 LRRC14BA6NHZ5 514 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 H3BNC9 293 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 TRIM38O00635 465 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 GPX3P22352 226 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 HOXD9P28356 352 aaPredicted RBP15.42■□□□□ 0.06
PTBP1-204ENST00000394601 PBX3P40426 434 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 SLC12A2P55011 1212 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 HERVK_113P63132 956 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 GEN1Q17RS7 908 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 PARP15Q460N3 678 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 PEX13Q92968 403 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 TSPAN17Q96FV3 270 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 ATOH8Q96SQ7 321 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 ERVK-6Q9BXR3 956 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 TUBB1Q9H4B7 451 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 TMED5Q9Y3A6 229 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 PTGDR2Q9Y5Y4 395 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 A0A0D9SEW6 157 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 CCDC162PA2VCL2 907 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 ITKQ08881 620 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 PPP1R8Q12972 351 aaKnown RBP15.42■□□□□ 0.06
PTBP1-204ENST00000394601 TRIM25Q14258 630 aaKnown RBP15.42■□□□□ 0.06
PTBP1-204ENST00000394601 GPNMBQ14956 572 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 POLD3Q15054 466 aaPredicted RBP15.42■□□□□ 0.06
PTBP1-204ENST00000394601 ADRM1Q16186 407 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 NFE2Q16621 373 aaPredicted RBP15.42■□□□□ 0.06
PTBP1-204ENST00000394601 TYSND1Q2T9J0 566 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 RETREG3Q86VR2 466 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 SLC22A9Q8IVM8 553 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 DLG3Q92796 817 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 SEPHS2Q99611 448 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 SEMA3CQ99985 751 aa15.42■□□□□ 0.06
PTBP1-204ENST00000394601 BEGAINQ9BUH8 593 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms