RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 KCNA7Q96RP8 456 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 ZNF251Q9BRH9 671 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 ALOXE3Q9BYJ1 711 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 FRMD8P1Q9BZ68 369 aaPredicted RBP11.33□□□□□ -0.6
LAMB1-203ENST00000393560 ZC3H12CQ9C0D7 883 aaKnown RBP11.33□□□□□ -0.6
LAMB1-203ENST00000393560 MKNK2Q9HBH9 465 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 ZFP14Q9HCL3 533 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 CMTM6Q9NX76 183 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 COL20A1Q9P218 1284 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 VAV3Q9UKW4 847 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 MGAT4BQ9UQ53 548 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 PRKRAO75569 313 aaKnown RBP11.33□□□□□ -0.6
LAMB1-203ENST00000393560 NOL4O94818 638 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 APOL3O95236 402 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 CPNE6O95741 557 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 H2AFZP0C0S5 128 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 CKMT1AP12532 417 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 NR2C1P13056 603 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 NDUFB7P17568 137 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 CHMP24386 653 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 SLC15A1P46059 708 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 SPCS3P61009 180 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 FRG1Q14331 258 aaKnown RBP11.33□□□□□ -0.6
LAMB1-203ENST00000393560 MANEALQ5VSG8 457 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 FUT10Q6P4F1 479 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 TXNDC11Q6PKC3 985 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 SPOCD1Q6ZMY3 1216 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 H2AFVQ71UI9 128 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 RCOR2Q8IZ40 523 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 DPP10Q8N608 796 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 OR6M1Q8NGM8 313 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 DNAJB8Q8NHS0 232 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 SLC20A1Q8WUM9 679 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 TFB1MQ8WVM0 346 aaKnown RBP11.33□□□□□ -0.6
LAMB1-203ENST00000393560 CPT1BQ92523 772 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 SYN2Q92777 582 aaPredicted RBP11.33□□□□□ -0.6
LAMB1-203ENST00000393560 CAMKK2Q96RR4 588 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 KIFC3Q9BVG8 833 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 DSN1Q9H410 356 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 ZNF768Q9H5H4 540 aaKnown RBP11.33□□□□□ -0.6
LAMB1-203ENST00000393560 ENTPD7Q9NQZ7 604 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 ITGA11Q9UKX5 1188 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 BAIAP2Q9UQB8 552 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 VPS9D1Q9Y2B5 631 aa11.33□□□□□ -0.6
LAMB1-203ENST00000393560 TNPO3Q9Y5L0 923 aaKnown RBP11.33□□□□□ -0.6
LAMB1-203ENST00000393560 MFSD2BA6NFX1 497 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 TO15178 435 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 FZD6O60353 706 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 LY86O95711 162 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 TRIM49P0CI25 452 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 TRIM49CP0CI26 452 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 RD3LP0DJH9 198 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 ADORA3P0DMS8 318 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 PFKLP17858 780 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 CTNNA2P26232 953 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 NAPAP54920 295 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 ERVK-25P63136 954 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 MS4A2Q01362 244 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 SPIRE1Q08AE8 756 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 CBX2Q14781 532 aaPredicted RBP11.32□□□□□ -0.6
LAMB1-203ENST00000393560 TRAM2Q15035 370 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 SEZ6L2Q6UXD5 910 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 C17orf107Q6ZR85 190 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 BNIPLQ7Z465 357 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 DPPA2Q7Z7J5 298 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 NIM1KQ8IY84 436 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 DNAAF3Q8N9W5 541 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 NDNFQ8TB73 568 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 PNPT1Q8TCS8 783 aaKnown RBP11.32□□□□□ -0.6
LAMB1-203ENST00000393560 NSUN6Q8TEA1 469 aaKnown RBP11.32□□□□□ -0.6
LAMB1-203ENST00000393560 FAM111AQ96PZ2 611 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 ERVK-6Q9BXR3 956 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 DGCR6LQ9BY27 220 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 SLC13A1Q9BZW2 595 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 QRSL1Q9H0R6 528 aaKnown RBP11.32□□□□□ -0.6
LAMB1-203ENST00000393560 SLAMF7Q9NQ25 335 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 ERVK-18Q9QC07 812 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 A0A0G2JPF8 293 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 PQLC2LA1A4F0 135 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 POM121BA6NF01 834 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 HNRNPCL3B7ZW38 293 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 G3V3G9 751 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 PIK3R2O00459 728 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 GPR171O14626 319 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 DCLK1O15075 740 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 B4GAT1O43505 415 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 CCNB2O95067 398 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 HNRNPCL4P0DMR1 293 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 MYF6P23409 242 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 PDHA2P29803 388 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 CRHR1P34998 444 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 PICALMQ13492 652 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 CAPRIN1Q14444 709 aaKnown RBP11.32□□□□□ -0.6
LAMB1-203ENST00000393560 TMEM44Q2T9K0 475 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 RFX4Q33E94 735 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 DGKKQ5KSL6 1271 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 DCAF8Q5TAQ9 597 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 KRT39Q6A163 491 aa11.32□□□□□ -0.6
LAMB1-203ENST00000393560 ZNF517Q6ZMY9 492 aaPredicted RBP11.32□□□□□ -0.6
LAMB1-203ENST00000393560 SSX9Q7RTT3 188 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms