RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 SMG9Q9H0W8 520 aaKnown RBP25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 ABCB8Q9NUT2 735 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 PCDHB1Q9Y5F3 818 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 PTPRSQ13332 1948 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 LEFTY2O00292 366 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 TRIM38O00635 465 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 MRASO14807 208 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 NRP2O60462 931 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 BCAS2O75934 225 aaPredicted RBP25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 PEX2P28328 305 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 MAPK8P45983 427 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 ECT2LQ008S8 904 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 KIF19Q2TAC6 998 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 OTOP2Q7RTS6 562 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 SERPINA9Q86WD7 417 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 FIBCD1Q8N539 461 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 FAM156AQ8NDB6 213 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 MYCBPQ99417 103 aaPredicted RBP25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 CD274Q9NZQ7 290 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 POLG2Q9UHN1 485 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 BCAP29Q9UHQ4 241 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 PSMD13Q9UNM6 376 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 DHRS7Q9Y394 339 aa25.36■■□□□ 1.65
SMARCD3-203ENST00000392811 ACOT8O14734 319 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 SNX2O60749 519 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 CRCPO75575 148 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 TCN1P20061 433 aaPredicted RBP25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 PRDX3P30048 256 aaKnown RBP25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 HNF1BP35680 557 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 NAA20P61599 178 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 MRPS22P82650 360 aaKnown RBP25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 CDKN3Q16667 212 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 DGKKQ5KSL6 1271 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 SYVN1Q86TM6 617 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 GRIN3AQ8TCU5 1115 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 ESAMQ96AP7 390 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 TUBGCP3Q96CW5 907 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 SLC46A2Q9BY10 475 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 TMCO1Q9UM00 188 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 TIMM22Q9Y584 194 aa25.35■■□□□ 1.65
SMARCD3-203ENST00000392811 SOCS5O75159 536 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 SMNDC1O75940 238 aaKnown RBP eCLIP25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 CLDN7O95471 211 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 CXCL14O95715 111 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 IGSF6O95976 241 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 PSMD8P48556 350 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 ATXN3P54252 364 aaPredicted RBP25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 MRPS35P82673 323 aaKnown RBP25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 TRIP10Q15642 601 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 CCDC149Q6ZUS6 474 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 PDSS2Q86YH6 399 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 NAT14Q8WUY8 206 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 CORO1BQ9BR76 489 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 HGH1Q9BTY7 390 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 KLHL4Q9C0H6 718 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 VCX3BQ9H321 246 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 ATP13A3Q9H7F0 1226 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 ZNF225Q9UK10 706 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 ASB1Q9Y576 335 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 CASQ2O14958 399 aaPredicted RBP25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 LINC00271P0C7V0 271 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 LBPP18428 481 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 NME5P56597 212 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 MICAL1Q8TDZ2 1067 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 PAWRQ96IZ0 340 aaKnown RBP25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 RPL10LQ96L21 214 aaKnown RBP25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 PLEKHG4BQ96PX9 1271 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 BOCQ9BWV1 1114 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 CLPBQ9H078 707 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 ASB8Q9H765 288 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 IL26Q9NPH9 171 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 EIF2B4Q9UI10 523 aaKnown RBP25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 SCN8AQ9UQD0 1980 aa25.34■■□□□ 1.65
SMARCD3-203ENST00000392811 ESRRBO95718 433 aa25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 MLYCDO95822 493 aa25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 ZNF7P17097 686 aaPredicted RBP25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 CTSOP43234 321 aaPredicted RBP25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 TGFBIQ15582 683 aa25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 RBBP7Q16576 425 aa25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 SFT2D3Q587I9 215 aa25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 PTRHD1Q6GMV3 140 aaKnown RBP25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 ZSWIM9Q86XI8 627 aa25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 CMTM8Q8IZV2 173 aa25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 PQLC1Q8N2U9 271 aa25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 KREMEN2Q8NCW0 462 aa25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 PDLIM5Q96HC4 596 aaKnown RBP25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 GCNAQ96QF7 691 aa25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 TSR3Q9UJK0 312 aaKnown RBP25.33■■□□□ 1.65
SMARCD3-203ENST00000392811 CAPN8A6NHC0 703 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 HGFP14210 728 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 STK19P49842 368 aaPredicted RBP25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 NFATC2Q13469 925 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 LAYNQ6UX15 382 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 SNX20Q7Z614 316 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 METTL3Q86U44 580 aaKnown RBP25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 ELMOD1Q8N336 334 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 MIER2Q8N344 545 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 KLHL23Q8NBE8 558 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 OR2AP1Q8NGE2 309 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 SLC22A17Q8WUG5 538 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms