RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 ATP1A1P05023 1023 aaKnown RBP2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 RB1P06400 928 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 SRPRAP08240 638 aaKnown RBP2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 CLTBP09497 229 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 FAM106CPP0CH98 169 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 ANXA7P20073 488 aaKnown RBP2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 UGT1A1P22309 533 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 TM4SF1P30408 202 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 MAPK4P31152 587 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 CAMPP49913 170 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 TERF1P54274 439 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 NAP1L1P55209 391 aaKnown RBP2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 CDH8P55286 799 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 COG7P83436 770 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 IKQ13123 557 aaPredicted RBP2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 ASTE1Q2TB18 679 aaPredicted RBP2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 C9orf50Q5SZB4 431 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 STXBP5Q5T5C0 1151 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 NSUN5P2Q63ZY6 315 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 JADE1Q6IE81 842 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 OR7E24Q6IFN5 339 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 CHST9Q7L1S5 443 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 ZNF771Q7L3S4 317 aaPredicted RBP2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 TSPAN33Q86UF1 283 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 TMPRSS12Q86WS5 348 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 PM20D2Q8IYS1 436 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 TMTC2Q8N394 836 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 TTC39CQ8N584 583 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 METTL27Q8N6F8 245 aaPredicted RBP2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 EMC1Q8N766 993 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 KBTBD3Q8NAB2 608 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 HJURPQ8NCD3 748 aaPredicted RBP2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 OR13A1Q8NGR1 328 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 UTP15Q8TED0 518 aaKnown RBP2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 TRPC4APQ8TEL6 797 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 TMEM255BQ8WV15 326 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 PGAM5Q96HS1 289 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 NODALQ96S42 347 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 SMC6Q96SB8 1091 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 SEMA3CQ99985 751 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 TMEM39BQ9GZU3 492 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 PLK3Q9H4B4 646 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 MTMR10Q9NXD2 777 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 OGFRQ9NZT2 677 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 ZNF711Q9Y462 761 aa2.98□□□□□ -1.93
RNU6-550P-201ENST00000391057 SCN5AQ14524 2016 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 TAF1P21675 1872 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 OR5K3A6NET4 321 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 DVL1O14640 695 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 CAPN9O14815 690 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 SMAD9O15198 467 aaKnown RBP2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 EIF3DO15371 548 aaKnown RBP eCLIP2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 BUD23O43709 281 aaKnown RBP2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 LMX1BO60663 402 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 IGLV2-11P01706 119 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 CRYAAP02489 173 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 GABRB1P18505 474 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 NR2F2P24468 414 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 ACADLP28330 430 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 MSH2P43246 934 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 GPR143P51810 404 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 DVL1P1P54792 670 aaPredicted RBP2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 ARL16Q0P5N6 197 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 PDSS1Q5T2R2 415 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 STPG1Q5TH74 334 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 PMS2CLQ68D20 193 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 KIAA0930Q6ICG6 404 aaPredicted RBP2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 LCN10Q6JVE6 187 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 FAM171BQ6P995 826 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 RAD9BQ6WBX8 426 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 CFAP77Q6ZQR2 320 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 KCTD8Q6ZWB6 473 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 PLEKHM3Q6ZWE6 761 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 DSG4Q86SJ6 1040 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 DMBX1Q8NFW5 382 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 OR52I2Q8NH67 350 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 GSDMBQ8TAX9 411 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 DNASE2BQ8WZ79 361 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 LINGO1Q96FE5 620 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 ZNF583Q96ND8 569 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 OR2A14Q96R47 310 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 GAD1Q99259 594 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 TREX2Q9BQ50 279 aaPredicted RBP2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 LRRC1Q9BTT6 524 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 C1QTNF1Q9BXJ1 281 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 LRMDAQ9H2I8 198 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 SMARCAD1Q9H4L7 1026 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 SYNCQ9H7C4 482 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 MARCH4Q9P2E8 410 aaPredicted RBP2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 POLG2Q9UHN1 485 aa2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 DBNLQ9UJU6 430 aaKnown RBP2.97□□□□□ -1.93
RNU6-550P-201ENST00000391057 ZCWPW2A0A1B0GU75 182 aa2.96□□□□□ -1.94
RNU6-550P-201ENST00000391057 A0A1W2PP11 408 aa2.96□□□□□ -1.94
RNU6-550P-201ENST00000391057 FAM172BPA6NC97 362 aa2.96□□□□□ -1.94
RNU6-550P-201ENST00000391057 PTGES3LE9PB15 166 aa2.96□□□□□ -1.94
RNU6-550P-201ENST00000391057 TMEM178BH3BS89 294 aa2.96□□□□□ -1.94
RNU6-550P-201ENST00000391057 PLPP2O43688 288 aa2.96□□□□□ -1.94
RNU6-550P-201ENST00000391057 FGF17O60258 216 aa2.96□□□□□ -1.94
RNU6-550P-201ENST00000391057 TMCC2O75069 709 aa2.96□□□□□ -1.94
RNU6-550P-201ENST00000391057 TPPPO94811 219 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms