RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CHST8Q9H2A9 424 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 NDST4Q9H3R1 872 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 SEPT11Q9NVA2 429 aaKnown RBP9.5□□□□□ -0.89
IFT88-203ENST00000389373 TRIM10Q9UDY6 481 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 SNX7Q9UNH6 387 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 AP4E1Q9UPM8 1137 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 OSGIN2Q9Y236 505 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 DNAJC16Q9Y2G8 782 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 DOPEY1Q5JWR5 2465 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 IGHV5-51A0A0C4DH38 117 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 SSU72P8A0A1W2PR75 194 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 SIGLEC16A6NMB1 481 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 F8VZ95 297 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 ZG16O60844 167 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 CLDN7O95471 211 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 CALB1P05937 261 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 KLK3P07288 261 aaPredicted RBP9.49□□□□□ -0.89
IFT88-203ENST00000389373 SNRPB2P08579 225 aaKnown RBP9.49□□□□□ -0.89
IFT88-203ENST00000389373 UCHL3P15374 230 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 CHRNB2P17787 502 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 HTR7P34969 479 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 ZNF143P52747 638 aaPredicted RBP9.49□□□□□ -0.89
IFT88-203ENST00000389373 AIF1P55008 147 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 RPL7AP62424 266 aaKnown RBP9.49□□□□□ -0.89
IFT88-203ENST00000389373 PTP4A2Q12974 167 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 INSCQ1MX18 579 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 PPP6R3Q5H9R7 873 aaPredicted RBP9.49□□□□□ -0.89
IFT88-203ENST00000389373 LYPLAL1Q5VWZ2 237 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 CRTC3Q6UUV7 619 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 CERS6Q6ZMG9 384 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 RFX8Q6ZV50 586 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 PRSS42Q7Z5A4 293 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 TMEM126BQ8IUX1 230 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 BBS5Q8N3I7 341 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 NPWQ8N729 165 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 ENDOVQ8N8Q3 282 aaKnown RBP9.49□□□□□ -0.89
IFT88-203ENST00000389373 PIH1D2Q8WWB5 315 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 SGSM3Q96HU1 749 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 KCTD15Q96SI1 283 aaPredicted RBP9.49□□□□□ -0.89
IFT88-203ENST00000389373 PCDHB18PQ96TA0 734 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 SMAD5Q99717 465 aaKnown RBP9.49□□□□□ -0.89
IFT88-203ENST00000389373 STK33Q9BYT3 514 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 RMI1Q9H9A7 625 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 UCK1Q9HA47 277 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 WASH6PQ9NQA3 447 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 FGF21Q9NSA1 209 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 VPS18Q9P253 973 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 ZNF624Q9P2J8 865 aaPredicted RBP9.49□□□□□ -0.89
IFT88-203ENST00000389373 PCSK1NQ9UHG2 260 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 NOCTQ9UK39 431 aaKnown RBP9.49□□□□□ -0.89
IFT88-203ENST00000389373 CNOT6Q9ULM6 557 aaKnown RBP9.49□□□□□ -0.89
IFT88-203ENST00000389373 B3GNT3Q9Y2A9 372 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 ABCA12Q86UK0 2595 aa9.49□□□□□ -0.89
IFT88-203ENST00000389373 FBN2P35556 2912 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 NUAK1O60285 661 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 DIAPH2O60879 1101 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 CPNE3O75131 537 aaKnown RBP9.48□□□□□ -0.89
IFT88-203ENST00000389373 SCRG1O75711 98 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 ZNF8P17098 575 aaPredicted RBP9.48□□□□□ -0.89
IFT88-203ENST00000389373 RPL10P27635 214 aaKnown RBP9.48□□□□□ -0.89
IFT88-203ENST00000389373 HSPA9P38646 679 aaKnown RBP9.48□□□□□ -0.89
IFT88-203ENST00000389373 VAV2P52735 878 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 STC1P52823 247 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 PPP1CAP62136 330 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 ACY1Q03154 408 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 GPS2Q13227 327 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 ZRSR2Q15696 482 aaKnown RBP9.48□□□□□ -0.89
IFT88-203ENST00000389373 ERMARDQ5T6L9 678 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 CRYBG3Q68DQ2 2970 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 LCN10Q6JVE6 187 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 DCUN1D2Q6PH85 259 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 TRIM72Q6ZMU5 477 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 MED25Q71SY5 747 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 ZNF765Q7L2R6 523 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 NLRP8Q86W28 1048 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 ELOA2Q8IYF1 753 aaPredicted RBP9.48□□□□□ -0.89
IFT88-203ENST00000389373 TMEM102Q8N9M5 508 aaPredicted RBP9.48□□□□□ -0.89
IFT88-203ENST00000389373 GLIS1Q8NBF1 620 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 C3orf20Q8ND61 904 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 NSMCE1Q8WV22 266 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 CXorf40BQ96DE9 158 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 ZNF599Q96NL3 588 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 FCRL4Q96PJ5 515 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 MCCC1Q96RQ3 725 aaPredicted RBP9.48□□□□□ -0.89
IFT88-203ENST00000389373 TUBGCP2Q9BSJ2 902 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 CNPY3Q9BT09 278 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 NAA15Q9BXJ9 866 aaKnown RBP9.48□□□□□ -0.89
IFT88-203ENST00000389373 OR2AG1Q9H205 316 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 CARD9Q9H257 536 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 NT5MQ9NPB1 228 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 FAM207AQ9NSI2 230 aaPredicted RBP9.48□□□□□ -0.89
IFT88-203ENST00000389373 ATXN10Q9UBB4 475 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 PPIL1Q9Y3C6 166 aa9.48□□□□□ -0.89
IFT88-203ENST00000389373 UBA6A0AVT1 1052 aaPredicted RBP9.47□□□□□ -0.89
IFT88-203ENST00000389373 OR52A4PA6NMU1 304 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 FADS2P1A8MWK0 482 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 DDX3YO15523 660 aaKnown RBP9.47□□□□□ -0.89
IFT88-203ENST00000389373 MTA2O94776 668 aa9.47□□□□□ -0.89
IFT88-203ENST00000389373 UNGP13051 313 aaPredicted RBP9.47□□□□□ -0.89
IFT88-203ENST00000389373 ZNF30P17039 623 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms