RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 BMP10O95393 424 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 EPB42P16452 691 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 GLDCP23378 1020 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 GRIA2P42262 883 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 NCF4Q15080 339 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 NFE2Q16621 373 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 AFTPHQ6ULP2 937 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 PNPLA1Q8N8W4 532 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 KLRG1Q96E93 195 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 BIRC8Q96P09 236 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 SLC9A7Q96T83 725 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 TDRD1Q9BXT4 1180 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 SMURF2Q9HAU4 748 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 CCNB1IP1Q9NPC3 277 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 IPPQ9Y573 584 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 CNTNAP1P78357 1384 aa13.05□□□□□ -0.32
TRAPPC9-201ENST00000389328 AIREO43918 545 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 AZGP1P25311 298 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 GRK3P35626 688 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 UFM1P61960 85 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 INCA1Q0VD86 236 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 TIMM50Q3ZCQ8 353 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 PRAMEF19Q5SWL8 479 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 SLC2A7Q6PXP3 512 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 CYS1Q717R9 158 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 PIK3C3Q8NEB9 887 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 MYDGFQ969H8 173 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 SNX27Q96L92 541 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 FOPNLQ96NB1 174 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 SLC25A51Q9H1U9 297 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 MARCH7Q9H992 704 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 PTCH2Q9Y6C5 1203 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 TBKBP1A7MCY6 615 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 NRP1O14786 923 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 EDN1P05305 212 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 UROSP10746 265 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 PORP16435 677 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 PCSK6P29122 969 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 TTPAP49638 278 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 COLEC12Q5KU26 742 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 ZNF773Q6PK81 442 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 C16orf59Q7L2K0 433 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 SLC22A16Q86VW1 577 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 LRRC49Q8IUZ0 686 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 ZNF420Q8TAQ5 688 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 RTP4Q96DX8 246 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 RPL10LQ96L21 214 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 PCYT2Q99447 389 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 FBXO44Q9H4M3 255 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 PRDM5Q9NQX1 630 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 POLE4Q9NR33 117 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 RIMS3Q9UJD0 308 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 hCG_2039718K7EN88 272 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 FGF1P05230 155 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 HLA-DQB2P05538 268 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 UGT2B4P06133 528 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 GNAO1P09471 354 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 GSTM1P09488 218 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 SMIM10L2AP0DMW4 78 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 SMIM10L2BP0DMW5 78 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 IL4RP24394 825 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 MC4RP32245 332 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 HSPA14Q0VDF9 509 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 FAM174BQ3ZCQ3 159 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 TMEM135Q86UB9 458 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 LILRA2Q8N149 483 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 CFAP52Q8N1V2 620 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 FEM1CQ96JP0 617 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 FCRL5Q96RD9 977 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 CCM2LQ9NUG4 571 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 SMPD4Q9NXE4 827 aa13.04□□□□□ -0.32
TRAPPC9-201ENST00000389328 E9PAM4 449 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 RPP40O75818 363 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ALDH1A2O94788 518 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ACSM2AQ08AH3 577 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ILF2Q12905 390 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 PAFAH1B3Q15102 231 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ACSM2BQ68CK6 577 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 KLHL17Q6TDP4 642 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 CLEC20AQ6ZU45 233 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 DMRTB1Q96MA1 342 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 CITED4Q96RK1 184 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 RPRD1BQ9NQG5 326 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 PDLIM7Q9NR12 457 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 DYRK4Q9NR20 520 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 RPS6KA6Q9UK32 745 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 TCAF2A6NFQ2 919 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 PKMP14618 531 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 CRATP43155 626 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 VEPH1Q14D04 833 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ZFP69Q49AA0 526 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 BRMS1LQ5PSV4 323 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 PAQR3Q6TCH7 311 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 MOB2Q70IA6 237 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 KRT73Q86Y46 540 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 SLC15A3Q8IY34 581 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 MED8Q96G25 268 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 ASB8Q9H765 288 aa13.03□□□□□ -0.32
TRAPPC9-201ENST00000389328 TLR8Q9NR97 1041 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms