RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 H3BMQ9 156 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 GJB5O95377 273 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 FDXRP22570 491 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 ESRRGP62508 458 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 NFYCQ13952 458 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 SPOUT1Q5T280 376 aaKnown RBP16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 KANK2Q63ZY3 851 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 DENND1CQ8IV53 801 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 MINDY1Q8N5J2 469 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 TMEM125Q96AQ2 219 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 RMDN1Q96DB5 314 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 CENPNQ96H22 339 aaPredicted RBP16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 SLC39A13Q96H72 371 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 COG8Q96MW5 612 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 ACOX2Q99424 681 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 ALG2Q9H553 416 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 SDR39U1Q9NRG7 319 aaPredicted RBP16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 INTS7Q9NVH2 962 aaKnown RBP16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 FADS3Q9Y5Q0 445 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 GMEB1Q9Y692 573 aa16.14■□□□□ 0.18
NKX3-1-201ENST00000380871 AQP12BA6NM10 295 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 BBIP1A8MTZ0 92 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 SUPT3HB4E1H0 165 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 SUPT3HO75486 399 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 HSD17B1P14061 328 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 KIAA1841Q6NSI8 718 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 AQP12AQ8IXF9 295 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 HOPXQ9BPY8 73 aaPredicted RBP16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 PRRC2BQ5JSZ5 2229 aaKnown RBP16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 GIPC1O14908 333 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 OR1D2P34982 312 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 POLR2IP36954 125 aaKnown RBP16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 UFM1P61960 85 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 NFKB2Q00653 900 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 LIPEQ05469 1076 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 ZIK1Q3SY52 487 aaPredicted RBP16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 CYBRD1Q53TN4 286 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 AARS2Q5JTZ9 985 aaKnown RBP16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 OTUD3Q5T2D3 398 aaPredicted RBP16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 UGT3A1Q6NUS8 523 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 BLOC1S3Q6QNY0 202 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 KIAA2013Q8IYS2 634 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 BTN2A3PQ96KV6 586 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 ATOH8Q96SQ7 321 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 HBEGFQ99075 208 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 RPF2Q9H7B2 306 aaKnown RBP16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 MRGBPQ9NV56 204 aa16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 MAGED1Q9Y5V3 778 aaPredicted RBP16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 OAS3Q9Y6K5 1087 aaKnown RBP16.14■□□□□ 0.17
NKX3-1-201ENST00000380871 BOLA2-SMG1P6H3BVE0 249 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 TIGD2Q4W5G0 525 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 TRAF7Q6Q0C0 670 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 ARRDC2Q8TBH0 407 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 MIPOL1Q8TD10 442 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 VPS50Q96JG6 964 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 GALPQ9UBC7 116 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 TET1Q8NFU7 2136 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 LAMA3Q16787 3333 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 CD3EAPO15446 510 aaKnown RBP16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 RASAL1O95294 804 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 LBPP18428 481 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 PSMD7P51665 324 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 PLIN5Q00G26 463 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 AAK1Q2M2I8 961 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 BBS5Q8N3I7 341 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 EFHBQ8N7U6 833 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 TRPV3Q8NET8 790 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 FEM1CQ96JP0 617 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 C8orf48Q96LL4 319 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 SLC30A3Q99726 388 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 LTB4R2Q9NPC1 389 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 ASB1Q9Y576 335 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 GPR45Q9Y5Y3 372 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 COL4A4P53420 1690 aaPredicted RBP16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 TCRBV5S2A0A599 114 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 TRIM64CA6NLI5 447 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 ELK4P28324 431 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 ZFP36L2P47974 494 aaKnown RBP16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 CLCQ05315 142 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 TSNQ15631 228 aaKnown RBP16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 TCTN1Q2MV58 587 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 NADSYN1Q6IA69 706 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 PAQR3Q6TCH7 311 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 LINGO4Q6UY18 593 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 KCTD8Q6ZWB6 473 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 SEPT8Q92599 483 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 SGCDQ92629 289 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 KCTD14Q9BQ13 255 aaPredicted RBP16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 C9orf16Q9BUW7 83 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 TRIM15Q9C019 465 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 TMEM161AQ9NX61 479 aa16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.13■□□□□ 0.17
NKX3-1-201ENST00000380871 CBX4O00257 560 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 CDC7O00311 574 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 GLP2RO95838 553 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 RFC2P35250 354 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 TRIP4Q15650 581 aaPredicted RBP16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 TMEM214Q6NUQ4 689 aaKnown RBP16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 DHRS4L2Q6PKH6 230 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms