RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ARSIQ5FYB1 569 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 LYPLAL1Q5VWZ2 237 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 PTRHD1Q6GMV3 140 aaKnown RBP19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 RFLNAQ6ZTI6 216 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 CUZD1Q86UP6 607 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 LINGO1Q96FE5 620 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 CADM1Q9BY67 442 aaKnown RBP19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 B4GALT6Q9UBX8 382 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 SLC8A2Q9UPR5 921 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 DHRS7Q9Y394 339 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 PRSS21Q9Y6M0 314 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 REV3LO60673 3130 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 NPEPPSL1A6NEC2 478 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 OTOL1A6NHN0 477 aaPredicted RBP19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 A8MUI8 341 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 B2RBV5 119 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 UBFD1O14562 309 aaKnown RBP19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 SIX3O95343 332 aaPredicted RBP19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 GFAPP14136 432 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 TSPAN8P19075 237 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 MESP2Q0VG99 397 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 BRAT1Q6PJG6 821 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 GET4Q7L5D6 327 aaPredicted RBP19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 CLDN19Q8N6F1 224 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 FUBP1Q96AE4 644 aaKnown RBP19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 PBXIP1Q96AQ6 731 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 TRMOQ9BU70 441 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 SLC27A6Q9Y2P4 619 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 FIS1Q9Y3D6 152 aa19.67■□□□□ 0.74
PDLIM5-205ENST00000380180 AGAP14A8MT82 685 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 HEPACAM2A8MVW5 462 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 SUPT3HB4E1H0 165 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 SUPT3HO75486 399 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 ECI2O75521 394 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 CTSLP07711 333 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 SRPRAP08240 638 aaKnown RBP19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 RAB44Q7Z6P3 723 aaPredicted RBP19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 ETFBKMTQ8IXQ9 262 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 NXPE1Q8N323 547 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 TEX9Q8N6V9 391 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 ZNF366Q8N895 744 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 WFIKKN2Q8TEU8 576 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 GNPTGQ9UJJ9 305 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 LRRC14BA6NHZ5 514 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 RFXAPO00287 272 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 GSC2O15499 205 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 DCXO43602 365 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 ASLP04424 464 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 C1SP09871 688 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 SLC6A11P48066 632 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 VASPP50552 380 aaPredicted RBP19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 CDH13P55290 713 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 ACAD11Q709F0 780 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 PHTF2Q8N3S3 785 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 FBXO27Q8NI29 283 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 MSRAQ9UJ68 235 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 CDYLQ9Y232 598 aa19.66■□□□□ 0.74
PDLIM5-205ENST00000380180 SYCE1LA8MT33 242 aa19.65■□□□□ 0.74
PDLIM5-205ENST00000380180 SPECC1L-ADORA2AF8WAN1 911 aa19.65■□□□□ 0.74
PDLIM5-205ENST00000380180 NFATC1O95644 943 aa19.65■□□□□ 0.74
PDLIM5-205ENST00000380180 FBXO39Q8N4B4 442 aa19.65■□□□□ 0.74
PDLIM5-205ENST00000380180 STON2Q8WXE9 905 aa19.65■□□□□ 0.74
PDLIM5-205ENST00000380180 CDCA3Q99618 268 aaPredicted RBP19.65■□□□□ 0.74
PDLIM5-205ENST00000380180 DZANK1Q9NVP4 752 aa19.65■□□□□ 0.74
PDLIM5-205ENST00000380180 ELOVL2Q9NXB9 296 aa19.65■□□□□ 0.74
PDLIM5-205ENST00000380180 IL36AQ9UHA7 158 aa19.65■□□□□ 0.74
PDLIM5-205ENST00000380180 TRPC5OSA6NMA1 111 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 PRRT4C9JH25 899 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 ATP6V1G2O95670 118 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 ITGB6P18564 788 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 SPINT3P49223 89 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 RIPK1Q13546 671 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 GAB4Q2WGN9 574 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 ATP13A5Q4VNC0 1218 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 GPR149Q86SP6 731 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 NXPE3Q969Y0 559 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 PLEKHG4BQ96PX9 1271 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 FAM83CQ9BQN1 747 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 SLC28A3Q9HAS3 691 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 GDE1Q9NZC3 331 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 TRAF6Q9Y4K3 522 aa19.64■□□□□ 0.74
PDLIM5-205ENST00000380180 KIAA1549LQ6ZVL6 1849 aa19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 CCDC189A1A4V9 331 aa19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 SLC25A14O95258 325 aaPredicted RBP19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 ARHGEF7Q14155 803 aa19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 NXNQ6DKJ4 435 aa19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 TMPRSS6Q8IU80 811 aa19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 POU5F2Q8N7G0 328 aa19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 RBM15BQ8NDT2 890 aaKnown RBP19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 LKAAEAR1Q8TD35 194 aa19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 PDLIM5Q96HC4 596 aaKnown RBP19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 MAELQ96JY0 434 aaKnown RBP19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 FAR2Q96K12 515 aa19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 CCDC28BQ9BUN5 200 aa19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 BAIAP2L1Q9UHR4 511 aa19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 CD84Q9UIB8 345 aa19.64■□□□□ 0.73
PDLIM5-205ENST00000380180 PLA2G4CQ9UP65 541 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms