RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 POLNQ7Z5Q5 900 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 LSMEM2Q8N112 164 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 ARHGAP24Q8N264 748 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 CHCHD4Q8N4Q1 142 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 PCDH20Q8N6Y1 951 aaKnown RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 SCAIQ8N9R8 606 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 TMEM145Q8NBT3 493 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 OR4E2Q8NGC2 313 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 OR2T34Q8NGX1 318 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 MAGEB18Q96M61 343 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 HERPUD2Q9BSE4 406 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 MAGEH1Q9H213 219 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 TRIT1Q9H3H1 467 aaKnown RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 MTG2Q9H4K7 406 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 COQ6Q9Y2Z9 468 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 COL2A1P02458 1487 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 MYH7BA7E2Y1 1941 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 A0A0J9YVX5 310 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 MAGEA13PA6NCF6 341 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 GPR32O75388 356 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 OR6A2O95222 327 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 MATN4O95460 622 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 CCNB1P14635 433 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 CLCN5P51795 746 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 SPDYCQ5MJ68 293 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 C1orf220Q5T0J3 134 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 MSANTD2Q6P1R3 559 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 PAOXQ6QHF9 649 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 Q6ZSR6 202 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 METTL27Q8N6F8 245 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 DRAXINQ8NBI3 349 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 OR2AP1Q8NGE2 309 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 CHFRQ96EP1 664 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 SLC17A9Q9BYT1 436 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 TRIM55Q9BYV6 548 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 ETNK2Q9NVF9 386 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 PSMC3IPQ9P2W1 217 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 C19orf25Q9UFG5 118 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 A0A1W2PPM1 405 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 IGLON5A6NGN9 336 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 B2RBV5 119 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 TIPRLO75663 272 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 USP1O94782 785 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 TCF4P15884 667 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 RHOQP17081 205 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 LPOP22079 712 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 ITPKAP23677 461 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 HDAC4P56524 1084 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 CLDN2P57739 230 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 OTUD4Q01804 1114 aaKnown RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 CNTN1Q12860 1018 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 HNRNPDQ14103 355 aaKnown RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 CSHL1Q14406 222 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 EFTUD2Q15029 972 aaKnown RBP eCLIP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 IYDQ6PHW0 289 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 SPOCD1Q6ZMY3 1216 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 C17orf64Q86WR6 236 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 POMGNT2Q8NAT1 580 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 GLIS1Q8NBF1 620 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 ACTL9Q8TC94 416 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 LRRN4Q8WUT4 740 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 RBM18Q96H35 190 aaKnown RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 COL25A1Q9BXS0 654 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 NUF2Q9BZD4 464 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 FBRSQ9HAH7 460 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 XPO7Q9UIA9 1087 aaKnown RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 TMA7Q9Y2S6 64 aaKnown RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 SNX8Q9Y5X2 465 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 MYH4Q9Y623 1939 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 DDX60LQ5H9U9 1706 aaKnown RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 LAMB1P07942 1786 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 GLYATL1P3A0A0U1RQE8 302 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 IQANK1A0A1B0GTG1 560 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 ZNF840PA6NDX5 716 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 GTPBP1O00178 669 aaKnown RBP6.49□□□□□ -1.37
NEDD9-202ENST00000379446 ADAM12O43184 909 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 PSTPIP1O43586 416 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 GUCY1B2O75343 617 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 KLHL18O94889 574 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 RETP07949 1114 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 IGFALSP35858 605 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 SKIV2L2P42285 1042 aaKnown RBP6.49□□□□□ -1.37
NEDD9-202ENST00000379446 RABIFP47224 123 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 ARFIP2P53365 341 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 AP1S1P61966 158 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 BNC1Q01954 994 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 IRF8Q02556 426 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 MTAPQ13126 283 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 SLC13A2Q13183 592 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 MAMLD1Q13495 774 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 MPP2Q14168 576 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 KHDC1Q4VXA5 237 aaKnown RBP6.49□□□□□ -1.37
NEDD9-202ENST00000379446 FSCBQ5H9T9 825 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 POMZP3Q6PJE2 187 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 Q6ZS52 159 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 NLRP9Q7RTR0 991 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 PIGWQ7Z7B1 504 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 TTC9BQ8N6N2 239 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 FBXO36Q8NEA4 188 aa6.49□□□□□ -1.37
NEDD9-202ENST00000379446 SEC14L1Q92503 715 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms