RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ZNF311Q5JNZ3 666 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 SLC41A1Q8IVJ1 513 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 C4orf19Q8IY42 314 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 SPAG16Q8N0X2 631 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 PCDH19Q8TAB3 1148 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 PTPRJQ12913 1337 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 TEX13CA0A0J9YWL9 993 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 AMPD1P23109 780 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 PSMA1P25786 263 aaKnown RBP11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 DCST1Q5T197 706 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 ATAD1Q8NBU5 361 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 PPP1R14BQ96C90 147 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 SLC6A15Q9H2J7 730 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 PCDHB16Q9NRJ7 776 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 GGA2Q9UJY4 613 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 CCZ1BP86790 482 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 CCZ1P86791 482 aaPredicted RBP11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 SLC34A1Q06495 639 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 MTF1Q14872 753 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 EIF1ADQ8N9N8 165 aaKnown RBP11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 NAT14Q8WUY8 206 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 FEM1CQ96JP0 617 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 EQTNQ9NQ60 294 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 ILVBLA1L0T0 632 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 RNASEH2AO75792 299 aaKnown RBP11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 SYCE2Q6PIF2 218 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 SSX6Q7RTT6 188 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PPP1R14DQ9NXH3 145 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 FAM234BA2RU67 622 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 USP27XA6NNY8 438 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 APOC4-APOC2K7ER74 178 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PSMD9O00233 223 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 SLC22A3O75751 556 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 WFS1O76024 890 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 APOC2P02655 101 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 ACTR1AP61163 376 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 NOMO2Q5JPE7 1267 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 RNF19BQ6ZMZ0 732 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PIGBOS1A0A0B4J2F0 54 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 EPHX1P07099 455 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 MAPK12P53778 367 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 UNC93AQ86WB7 457 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 NEDD4LQ96PU5 975 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 STRADBQ9C0K7 418 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 GDAP2Q9NXN4 497 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 RUVBL1Q9Y265 456 aaKnown RBP11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 SYNGR4O95473 234 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 ATF4P18848 351 aaPredicted RBP11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 SLC1A2P43004 574 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 RAB10P61026 200 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 TMPRSS11BQ86T26 416 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 REXO1L1PQ8IX06 675 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 JMJD4Q9H9V9 463 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 SORCS3Q9UPU3 1222 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 INO80Q9ULG1 1556 aaPredicted RBP11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 ZNF3P17036 446 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 USF2Q15853 346 aaPredicted RBP11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 UTS2BQ765I0 119 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 ARL8BQ9NVJ2 186 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PROCP04070 461 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 DRG2P55039 364 aaKnown RBP11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 ACVR2BQ13705 512 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 UNQ6126/PRO20091Q6UXV3 157 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 TTLQ8NG68 377 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 ALDH5A1P51649 535 aaPredicted RBP11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 WSCD1Q658N2 575 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 MLXQ9UH92 298 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PXDNLA1KZ92 1463 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PLD2O14939 933 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 DNAJA1P31689 397 aaKnown RBP11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 LINGO1Q96FE5 620 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 RC3H2Q9HBD1 1191 aaKnown RBP11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 DKKL1Q9UK85 242 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PCDHB3Q9Y5E6 796 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 LAMP2P13473 410 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PGDP52209 483 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 ALG10BQ5I7T1 473 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 MCOLN2Q8IZK6 566 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 ZNF350Q9GZX5 532 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 MDFIC2A0A1B0GVS7 189 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 LINGO3P0C6S8 592 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PITPNAQ00169 270 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 DNM1P34Q6PK57 102 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 B3GNT6Q6ZMB0 384 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PTGR2Q8N8N7 351 aaPredicted RBP11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 ISCA1Q9BUE6 129 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 C14orf166Q9Y224 244 aaKnown RBP11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PIK3CBP42338 1070 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PLA2G4EQ3MJ16 856 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 LDLRAP1Q5SW96 308 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 SMARCD3Q6STE5 483 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 CES3Q6UWW8 571 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 GPAT4Q86UL3 456 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 BRSK1Q8TDC3 778 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 PYDC1Q8WXC3 89 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 EHD4Q9H223 541 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 MAN2B2Q9Y2E5 1009 aa11.16□□□□□ -0.62
PTCHD1-201ENST00000379361 ZNF234Q14588 700 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 LY6KQ17RY6 165 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms