RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 PPP3R2Q96LZ3 170 aa16.23■□□□□ 0.19
RGP1-201ENST00000378078 CITED4Q96RK1 184 aa16.23■□□□□ 0.19
RGP1-201ENST00000378078 SLC39A8Q9C0K1 460 aa16.23■□□□□ 0.19
RGP1-201ENST00000378078 PORCNQ9H237 461 aa16.23■□□□□ 0.19
RGP1-201ENST00000378078 PHPT1Q9NRX4 125 aaPredicted RBP16.23■□□□□ 0.19
RGP1-201ENST00000378078 FAM105AQ9NUU6 356 aa16.23■□□□□ 0.19
RGP1-201ENST00000378078 XPR1Q9UBH6 696 aa16.23■□□□□ 0.19
RGP1-201ENST00000378078 LEF1Q9UJU2 399 aaPredicted RBP16.23■□□□□ 0.19
RGP1-201ENST00000378078 TBC1D30Q9Y2I9 924 aa16.23■□□□□ 0.19
RGP1-201ENST00000378078 KCNE2Q9Y6J6 123 aa16.23■□□□□ 0.19
RGP1-201ENST00000378078 CDKN1CP49918 316 aaPredicted RBP16.23■□□□□ 0.19
RGP1-201ENST00000378078 DNAAF1Q8NEP3 725 aa16.23■□□□□ 0.19
RGP1-201ENST00000378078 SLC16A10Q8TF71 515 aa16.23■□□□□ 0.19
RGP1-201ENST00000378078 SPAG4Q9NPE6 437 aa16.23■□□□□ 0.19
RGP1-201ENST00000378078 AK5Q9Y6K8 562 aa16.23■□□□□ 0.19
RGP1-201ENST00000378078 KERAO60938 352 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 LGR5O75473 907 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 ZNF460Q14592 562 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 HSDL1Q3SXM5 330 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 C11orf65Q8NCR3 313 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 TBC1D17Q9HA65 648 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 ARHGEF5Q12774 1597 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 TULP4Q9NRJ4 1543 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 GPR89AB7ZAQ6 455 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 H3BQF6 201 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 PAEPP09466 180 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 GPR89BP0CG08 455 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 UGCGQ16739 394 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 CRELD1Q96HD1 420 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 CRNNQ9UBG3 495 aaPredicted RBP16.22■□□□□ 0.19
RGP1-201ENST00000378078 ALPPL2P10696 532 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 CATSPERGQ6ZRH7 1159 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 LIX1Q8N485 282 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 SPERTQ8NA61 448 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 SIDT2Q8NBJ9 832 aaKnown RBP16.22■□□□□ 0.19
RGP1-201ENST00000378078 PIK3C3Q8NEB9 887 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 C8orf4Q9NR00 106 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 NR2E1Q9Y466 385 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 CCKBRP32239 447 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 GLUD2P49448 558 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 CAPN13Q6MZZ7 669 aaPredicted RBP16.22■□□□□ 0.19
RGP1-201ENST00000378078 CLPTM1LQ96KA5 538 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 FTHL17Q9BXU8 183 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 EXD2Q9NVH0 621 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 ABCC3O15438 1527 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 F7P08709 466 aaPredicted RBP16.22■□□□□ 0.19
RGP1-201ENST00000378078 CLCNKBP51801 687 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 TSPAN5P62079 268 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 PPP3R1P63098 170 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 TBATAQ96M53 351 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 PPM1MQ96MI6 270 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 PLAGL2Q9UPG8 496 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 YARS2Q9Y2Z4 477 aaKnown RBP16.22■□□□□ 0.19
RGP1-201ENST00000378078 RIC1Q4ADV7 1423 aa16.22■□□□□ 0.19
RGP1-201ENST00000378078 FAM227AF5H4B4 570 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 CYB5AP00167 134 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 BTN3A2P78410 334 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 RBFAQ8N0V3 343 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 ZBTB2Q8N680 514 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 HPS1Q92902 700 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 hCG_2039718K7EN88 272 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 CCR10P46092 362 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 CLCN7P51798 805 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 MPP5Q8N3R9 675 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 BOLLQ8N9W6 283 aaKnown RBP16.21■□□□□ 0.19
RGP1-201ENST00000378078 S100ZQ8WXG8 99 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 COPS8Q99627 209 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 BRF2Q9HAW0 419 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 ING4Q9UNL4 249 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 TMEM88BA6NKF7 163 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 NUDT17P0C025 328 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 PSME3P61289 254 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 SMARCB1Q12824 385 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 ANXA8L1Q5VT79 327 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 ZCCHC12Q6PEW1 402 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 OR10H4Q8NGA5 316 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 TESCQ96BS2 214 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 SCLYQ96I15 445 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 RAI2Q9Y5P3 530 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 E2F3O00716 465 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 TREHO43280 583 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 HSPA7P48741 367 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 LINGO2Q7L985 606 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 OR6K6Q8NGW6 343 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 RBM18Q96H35 190 aaKnown RBP16.21■□□□□ 0.19
RGP1-201ENST00000378078 SEC61A2Q9H9S3 476 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 PLAGL1Q9UM63 463 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 PCDHGA6Q9Y5G7 932 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 CCDC163A0A0D9SF12 145 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 MYOCOSA0A1B0GUC4 107 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 FAM86C2PA6NEL3 165 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 CDK14O94921 469 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 GNSP15586 552 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 BROXQ5VW32 411 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 LPIN3Q9BQK8 851 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 PRDM12Q9H4Q4 367 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 ACTL7BQ9Y614 415 aa16.21■□□□□ 0.19
RGP1-201ENST00000378078 INO80Q9ULG1 1556 aaPredicted RBP16.21■□□□□ 0.19
RGP1-201ENST00000378078 GSC2O15499 205 aa16.21■□□□□ 0.18
RGP1-201ENST00000378078 CPNE6O95741 557 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms