RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 ACVR1Q04771 509 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 ZNF235Q14590 738 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 TRIM16LQ309B1 348 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 PITRM1Q5JRX3 1037 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 BTLAQ7Z6A9 289 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 GALNT7Q86SF2 657 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 CUZD1Q86UP6 607 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 TFAP2CQ92754 450 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 TSPAN17Q96FV3 270 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 FBXL20Q96IG2 436 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 SMIM14Q96QK8 99 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 MUC3BQ9H195 1237 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 SLC38A8A6NNN8 435 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 A8MU76 341 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 ARVCFO00192 962 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 TPST1O60507 370 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 GJB5O95377 273 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 RBP1P09455 135 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 SLC7A1P30825 629 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 MAPKAPK2P49137 400 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 PRKCQQ04759 706 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 SNX29P2Q8IUI4 249 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 CBR4Q8N4T8 237 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 HMGCLL1Q8TB92 370 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 ITGB1BP2Q9UKP3 347 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 ZFP37Q9Y6Q3 630 aaPredicted RBP17.03■□□□□ 0.32
TRIM27-201ENST00000377194 F5H5T6 163 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 COL6A1P12109 1028 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 PERM1Q5SV97 790 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 THOC7Q6I9Y2 204 aaKnown RBP17.03■□□□□ 0.32
TRIM27-201ENST00000377194 CYHR1Q6ZMK1 362 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 PELI3Q8N2H9 469 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 CYGBQ8WWM9 190 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 STON2Q8WXE9 905 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 FEM1CQ96JP0 617 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 EXOC2Q96KP1 924 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 UNC93B1Q9H1C4 597 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 GSTO2Q9H4Y5 243 aa17.03■□□□□ 0.32
TRIM27-201ENST00000377194 ELAC1Q9H777 363 aaKnown RBP17.03■□□□□ 0.32
TRIM27-201ENST00000377194 POLR3BQ9NW08 1133 aaPredicted RBP17.03■□□□□ 0.32
TRIM27-201ENST00000377194 TCRBV3S1A0A5B6 114 aa17.02■□□□□ 0.32
TRIM27-201ENST00000377194 TRPC5OSA6NMA1 111 aa17.02■□□□□ 0.32
TRIM27-201ENST00000377194 TRIM24O15164 1050 aa17.02■□□□□ 0.32
TRIM27-201ENST00000377194 CD3EAPO15446 510 aaKnown RBP17.02■□□□□ 0.32
TRIM27-201ENST00000377194 MLLT10P55197 1068 aa17.02■□□□□ 0.32
TRIM27-201ENST00000377194 MOGQ16653 247 aa17.02■□□□□ 0.32
TRIM27-201ENST00000377194 CRIPAKQ8N1N5 446 aa17.02■□□□□ 0.32
TRIM27-201ENST00000377194 RAET1EQ8TD07 263 aa17.02■□□□□ 0.32
TRIM27-201ENST00000377194 ACDQ96AP0 544 aa17.02■□□□□ 0.32
TRIM27-201ENST00000377194 SOX17Q9H6I2 414 aaPredicted RBP17.02■□□□□ 0.32
TRIM27-201ENST00000377194 UTP6Q9NYH9 597 aaKnown RBP17.02■□□□□ 0.32
TRIM27-201ENST00000377194 ERGIC3Q9Y282 383 aa17.02■□□□□ 0.32
TRIM27-201ENST00000377194 PPP6CO00743 305 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 KDM1AO60341 852 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 GLP2RO95838 553 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 HLA-DPA1P20036 260 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 MAP4P27816 1152 aaKnown RBP17.02■□□□□ 0.31
TRIM27-201ENST00000377194 RAB15P59190 212 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 IL31Q6EBC2 164 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 CLEC6AQ6EIG7 209 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 PPP4R4Q6NUP7 873 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 KCTD8Q6ZWB6 473 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 IGFN1Q86VF2 1251 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 RAVER1Q8IY67 606 aaKnown RBP17.02■□□□□ 0.31
TRIM27-201ENST00000377194 GABPB2Q8TAK5 448 aaPredicted RBP17.02■□□□□ 0.31
TRIM27-201ENST00000377194 BRSK1Q8TDC3 778 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 STARD8Q92502 1023 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 TRIB3Q96RU7 358 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 TSEN34Q9BSV6 310 aaKnown RBP17.02■□□□□ 0.31
TRIM27-201ENST00000377194 SPON2Q9BUD6 331 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 GIN1Q9NXP7 522 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 CACNA2D2Q9NY47 1150 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 DAPK2Q9UIK4 370 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 GNPTGQ9UJJ9 305 aa17.02■□□□□ 0.31
TRIM27-201ENST00000377194 LAMA3Q16787 3333 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 CHD5Q8TDI0 1954 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 H3BNC9 293 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 AQP9O43315 295 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 ACSL4O60488 711 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 MT-CO1P00395 513 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 EPOP01588 193 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 KLKB1P03952 638 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 FGF1P05230 155 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 HSPA1AP0DMV8 641 aaKnown RBP17.01■□□□□ 0.31
TRIM27-201ENST00000377194 HSPA1BP0DMV9 641 aaKnown RBP17.01■□□□□ 0.31
TRIM27-201ENST00000377194 FDXRP22570 491 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 DCKP27707 260 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 SGSHP51688 502 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 CDH13P55290 713 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 LRP8Q14114 963 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 REP15Q6BDI9 236 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 RYBPQ8N488 228 aaPredicted RBP17.01■□□□□ 0.31
TRIM27-201ENST00000377194 HPS1Q92902 700 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 ITPKCQ96DU7 683 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 CCDC126Q96EE4 140 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 UHRF1Q96T88 793 aaPredicted RBP17.01■□□□□ 0.31
TRIM27-201ENST00000377194 TTPALQ9BTX7 342 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 CCDC167Q9P0B6 97 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 SPO11Q9Y5K1 396 aa17.01■□□□□ 0.31
TRIM27-201ENST00000377194 ST14Q9Y5Y6 855 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms