RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 AVL9Q8NBF6 648 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 SPATA22Q8NHS9 363 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 NKD1Q969G9 470 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 OSGEPL1Q9H4B0 414 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 GLOD4Q9HC38 313 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 TRIM39Q9HCM9 518 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 KLC4Q9NSK0 619 aa20.79■□□□□ 0.92
VSX1-201ENST00000376707 A0A0A6YYK5 440 aaPredicted RBP20.78■□□□□ 0.92
VSX1-201ENST00000376707 GPR89AB7ZAQ6 455 aa20.78■□□□□ 0.92
VSX1-201ENST00000376707 MT-CYBP00156 380 aaPredicted RBP20.78■□□□□ 0.92
VSX1-201ENST00000376707 GPR89BP0CG08 455 aa20.78■□□□□ 0.92
VSX1-201ENST00000376707 UGT1A3P35503 534 aa20.78■□□□□ 0.92
VSX1-201ENST00000376707 MAGEA1P43355 309 aa20.78■□□□□ 0.92
VSX1-201ENST00000376707 EPHA4P54764 986 aa20.78■□□□□ 0.92
VSX1-201ENST00000376707 TEX44Q53QW1 395 aa20.78■□□□□ 0.92
VSX1-201ENST00000376707 MFSD7Q6UXD7 560 aa20.78■□□□□ 0.92
VSX1-201ENST00000376707 BZW1Q7L1Q6 419 aaKnown RBP20.78■□□□□ 0.92
VSX1-201ENST00000376707 GLYATL1Q969I3 302 aa20.78■□□□□ 0.92
VSX1-201ENST00000376707 TADA1Q96BN2 335 aa20.78■□□□□ 0.92
VSX1-201ENST00000376707 SRPK1Q96SB4 655 aaKnown RBP20.78■□□□□ 0.92
VSX1-201ENST00000376707 PRDM8Q9NQV8 689 aa20.78■□□□□ 0.92
VSX1-201ENST00000376707 NFKBIL1Q9UBC1 381 aaPredicted RBP20.78■□□□□ 0.92
VSX1-201ENST00000376707 CPNE7Q9UBL6 633 aa20.78■□□□□ 0.92
VSX1-201ENST00000376707 PSTPIP1O43586 416 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 PMPCBO75439 489 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 NDST3O95803 873 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 CDKN2BP42772 138 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 NOP2P46087 812 aaKnown RBP20.77■□□□□ 0.92
VSX1-201ENST00000376707 NR2C2P49116 596 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 CLCNKAP51800 687 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 CYP4F2P78329 520 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 TFDP2Q14188 446 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 INSCQ1MX18 579 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 ANKS6Q68DC2 871 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 CRTC3Q6UUV7 619 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 ADGRG6Q86SQ4 1221 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 CCDC170Q8IYT3 715 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 CACNA2D3Q8IZS8 1091 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 TEFMQ96QE5 360 aaKnown RBP20.77■□□□□ 0.92
VSX1-201ENST00000376707 EPB41L1Q9H4G0 881 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 UBP1Q9NZI7 540 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 ADGRG1Q9Y653 693 aa20.77■□□□□ 0.92
VSX1-201ENST00000376707 BPIP17213 487 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 PTPN3P26045 913 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 NFATC3Q12968 1075 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 PRKD1Q15139 912 aaPredicted RBP20.76■□□□□ 0.91
VSX1-201ENST00000376707 TBR1Q16650 682 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 PLA2G4EQ3MJ16 856 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 KAZNQ674X7 775 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 ARHGAP22Q7Z5H3 698 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 LRRTM4Q86VH4 590 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 BMPERQ8N8U9 685 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 TFB1MQ8WVM0 346 aaKnown RBP20.76■□□□□ 0.91
VSX1-201ENST00000376707 TEKT5Q96M29 485 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 TBC1D10AQ9BXI6 508 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 SAE1Q9UBE0 346 aaPredicted RBP20.76■□□□□ 0.91
VSX1-201ENST00000376707 KLHL3Q9UH77 587 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 ALG6Q9Y672 507 aa20.76■□□□□ 0.91
VSX1-201ENST00000376707 COL6A6A6NMZ7 2263 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 LILRA5A6NI73 299 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 CHUKO15111 745 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 KMOO15229 486 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 SLC28A2O43868 658 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 VEGFDO43915 354 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 RAD1O60671 282 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 CST8O60676 142 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 FAM87AP0C7U9 286 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 TNNT3P45378 269 aaPredicted RBP20.75■□□□□ 0.91
VSX1-201ENST00000376707 MC2RQ01718 297 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 TRIM48Q8IWZ4 208 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 HTR3CQ8WXA8 447 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 PLEKHG4BQ96PX9 1271 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 FAM117AQ9C073 453 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 PCDHA13Q9Y5I0 950 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 SPO11Q9Y5K1 396 aa20.75■□□□□ 0.91
VSX1-201ENST00000376707 HEMK1Q9Y5R4 338 aaPredicted RBP20.75■□□□□ 0.91
VSX1-201ENST00000376707 PDZK1P1A8MUH7 402 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 MTX2O75431 263 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 CDK14O94921 469 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 VIPP01282 170 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 SFTPCP11686 197 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 PECAM1P16284 738 aaPredicted RBP20.74■□□□□ 0.91
VSX1-201ENST00000376707 ZNF7P17097 686 aaPredicted RBP20.74■□□□□ 0.91
VSX1-201ENST00000376707 UBE2IP63279 158 aaKnown RBP20.74■□□□□ 0.91
VSX1-201ENST00000376707 LLGL1Q15334 1064 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 C11orf63Q6NUN7 778 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 CEACAM20Q6UY09 585 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 SPOCD1Q6ZMY3 1216 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 PRICKLE2Q7Z3G6 844 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 PLXDC1Q8IUK5 500 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 KATNAL2Q8IYT4 538 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 RTP4Q96DX8 246 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 MRFAP1L1Q96HT8 127 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 CTRCQ99895 268 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 BPIFA1Q9NP55 256 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 SLC23A2Q9UGH3 650 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 FAM153AQ9UHL3 310 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 DNAJC16Q9Y2G8 782 aa20.74■□□□□ 0.91
VSX1-201ENST00000376707 PIEZO2Q9H5I5 2752 aa20.73■□□□□ 0.91
VSX1-201ENST00000376707 AURKAO14965 403 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms