RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 SMPDL3BQ92485 455 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 NIFKQ9BYG3 293 aaKnown RBP17.04■□□□□ 0.32
MCF2L-203ENST00000375604 PHPT1Q9NRX4 125 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-203ENST00000375604 ACTL7BQ9Y614 415 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 C15orf38-AP3S2A0A0A6YYH1 394 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 RHPN2P1A8MT19 583 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 POLR2JP52435 117 aaKnown RBP17.04■□□□□ 0.32
MCF2L-203ENST00000375604 PRR23BQ6ZRT6 265 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 ARPINQ7Z6K5 226 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 DHDDSQ86SQ9 333 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 MMADHCQ9H3L0 296 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-203ENST00000375604 FAM149AA5PLN7 773 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 YJEFN3A6XGL0 299 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 E7ENQ6 273 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 FOLH1Q04609 750 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 DMPKQ09013 629 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 SUZ12Q15022 739 aaKnown RBP17.04■□□□□ 0.32
MCF2L-203ENST00000375604 ARSIQ5FYB1 569 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 UBXN11Q5T124 520 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 LRTM1Q9HBL6 345 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 TBC1D30Q9Y2I9 924 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 NFATC1O95644 943 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 C2P06681 752 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 PRKCHP24723 683 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 RPIAP49247 311 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 SP2Q02086 613 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 PITRM1Q5JRX3 1037 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 TTC27Q6P3X3 843 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 HMGB4Q8WW32 186 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 HERVK_113Q902F9 699 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 ZNF536O15090 1300 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 RPTORQ8N122 1335 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 A8MU76 341 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 UNC5CO95185 931 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 METTL18O95568 372 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 PKMP14618 531 aaKnown RBP17.04■□□□□ 0.32
MCF2L-203ENST00000375604 IDO1P14902 403 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 PCDH1Q08174 1060 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 TIGD5Q53EQ6 642 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 MSANTD2Q6P1R3 559 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 IRF2BP1Q8IU81 584 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 PSMA8Q8TAA3 256 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 CLP1Q92989 425 aaKnown RBP17.04■□□□□ 0.32
MCF2L-203ENST00000375604 KCTD5Q9NXV2 234 aa17.04■□□□□ 0.32
MCF2L-203ENST00000375604 EIF2B4Q9UI10 523 aaKnown RBP17.04■□□□□ 0.32
MCF2L-203ENST00000375604 DHRS12A0PJE2 317 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 A8MUA0 341 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 UGT2B17O75795 530 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 ZNF8P17098 575 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-203ENST00000375604 DGKGP49619 791 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 CAMK1DQ8IU85 385 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 RP9Q8TA86 221 aaKnown RBP17.03■□□□□ 0.32
MCF2L-203ENST00000375604 AIF1LQ9BQI0 150 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 TMEM138Q9NPI0 162 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 IGLV3-22A0A075B6J6 115 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 ALOX15BO15296 676 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 BPGMP07738 259 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 LSM12Q3MHD2 195 aaKnown RBP17.03■□□□□ 0.32
MCF2L-203ENST00000375604 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.03■□□□□ 0.322e-7■■■■□ 25.6
MCF2L-203ENST00000375604 PAOXQ6QHF9 649 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 ZNF730Q6ZMV8 503 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 ZNF607Q96SK3 696 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 SPATA5L1Q9BVQ7 753 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 PRDM16Q9HAZ2 1276 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 CLDND1Q9NY35 253 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 RBM7Q9Y580 266 aaKnown RBP17.03■□□□□ 0.32
MCF2L-203ENST00000375604 LRRC72A6NJI9 287 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 PPEF2O14830 753 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 GCATO75600 419 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 CHRNB2P17787 502 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 TNFRSF8P28908 595 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 ATP6V0D1P61421 351 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 SLC10A6Q3KNW5 377 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 MPP5Q8N3R9 675 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 PSIP1O75475 530 aaKnown RBP17.03■□□□□ 0.32
MCF2L-203ENST00000375604 SAGP10523 405 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-203ENST00000375604 CDH4P55283 916 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 ANXA8L1Q5VT79 327 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 BEND5Q7L4P6 421 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 KREMEN2Q8NCW0 462 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 ZNF248Q8NDW4 579 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 ZMIZ2Q8NF64 920 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 TSPAN14Q8NG11 270 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 HYAL2Q12891 473 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 PPIGQ13427 754 aaKnown RBP eCLIP17.03■□□□□ 0.324e-7■■■□□ 15.7
MCF2L-203ENST00000375604 KRR1Q13601 381 aaKnown RBP17.03■□□□□ 0.32
MCF2L-203ENST00000375604 TRIM40Q6P9F5 258 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 FUKQ8N0W3 1084 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 DAW1Q8N136 415 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 PDCD10Q9BUL8 212 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 OR2AG1Q9H205 316 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 GSTK1Q9Y2Q3 226 aa17.03■□□□□ 0.32
MCF2L-203ENST00000375604 VNN1O95497 513 aa17.02■□□□□ 0.32
MCF2L-203ENST00000375604 RTP1P59025 263 aa17.02■□□□□ 0.32
MCF2L-203ENST00000375604 SCRN3Q0VDG4 424 aa17.02■□□□□ 0.32
MCF2L-203ENST00000375604 BHLHB9Q6PI77 547 aa17.02■□□□□ 0.32
MCF2L-203ENST00000375604 ADAMTS15Q8TE58 950 aa17.02■□□□□ 0.32
MCF2L-203ENST00000375604 C5orf34Q96MH7 638 aa17.02■□□□□ 0.32
MCF2L-203ENST00000375604 YIPF4Q9BSR8 244 aa17.02■□□□□ 0.32
MCF2L-203ENST00000375604 RNF39Q9H2S5 420 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms