RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 NCSTNQ92542 709 aa13.05□□□□□ -0.32
CUL4A-203ENST00000375441 RANBP9Q96S59 729 aa13.05□□□□□ -0.32
CUL4A-203ENST00000375441 OPTCQ9UBM4 332 aa13.05□□□□□ -0.32
CUL4A-203ENST00000375441 SNAP29O95721 258 aa13.05□□□□□ -0.32
CUL4A-203ENST00000375441 S1PR4O95977 384 aa13.05□□□□□ -0.32
CUL4A-203ENST00000375441 CAPN1P07384 714 aa13.05□□□□□ -0.32
CUL4A-203ENST00000375441 GNAO1P09471 354 aa13.05□□□□□ -0.32
CUL4A-203ENST00000375441 CNPP09543 421 aaKnown RBP13.05□□□□□ -0.32
CUL4A-203ENST00000375441 OTUD1Q5VV17 481 aaPredicted RBP13.05□□□□□ -0.32
CUL4A-203ENST00000375441 CPNE9Q8IYJ1 553 aa13.05□□□□□ -0.32
CUL4A-203ENST00000375441 GSTO2Q9H4Y5 243 aa13.05□□□□□ -0.32
CUL4A-203ENST00000375441 GPBP1L1Q9HC44 474 aaPredicted RBP13.05□□□□□ -0.32
CUL4A-203ENST00000375441 PPP6CO00743 305 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 HAPLN1P10915 354 aaPredicted RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 CAPN3P20807 821 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 CDH3P22223 829 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 CLCN2P51788 898 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 TAF10Q12962 218 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 UBXN11Q5T124 520 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 SLC2A7Q6PXP3 512 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 CRTC3Q6UUV7 619 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 CMTR2Q8IYT2 770 aaKnown RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 NAT16Q8N8M0 369 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 KLHL23Q8NBE8 558 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 SIDT2Q8NBJ9 832 aaKnown RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 OR7D4Q8NG98 312 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 CLHC1Q8NHS4 586 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 RSPH1Q8WYR4 309 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 PGAP3Q96FM1 320 aaPredicted RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 CDKN2AIPNLQ96HQ2 116 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 C3orf30Q96M34 536 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ANKRD60Q9BZ19 345 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 SMOC2Q9H3U7 446 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 RMND5AQ9H871 391 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 MIOSQ9NXC5 875 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 RNF11Q9Y3C5 154 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 A8MX80 341 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 RSL1D1O76021 490 aaKnown RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 BMP10O95393 424 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 BMP2P12643 396 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ZNF7P17097 686 aaPredicted RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ATP4BP51164 291 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 GNA12Q03113 381 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 MYBPC3Q14896 1274 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 KIAA0319Q5VV43 1072 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 MSANTD2Q6P1R3 559 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ZNF467Q7Z7K2 595 aaPredicted RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 CARNMT1Q8N4J0 409 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 LINC01465Q8N7H1 131 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 BIRC7Q96CA5 298 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 SLC45A3Q96JT2 553 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 LRRC3Q9BY71 257 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ELOVL6Q9H5J4 265 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 INTS10Q9NVR2 710 aaKnown RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 TMEM181Q9P2C4 612 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 PCDHGC4Q9Y5F7 938 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 NRXN2Q9P2S2 1712 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 MOXD2PA6NHM9 499 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 NOBOXO60393 691 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ULK1O75385 1050 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ITGALP20701 1170 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 S100A3P33764 101 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ARCN1P48444 511 aaKnown RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 AFF1P51825 1210 aaKnown RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 IL10RBQ08334 325 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 MAD2L1Q13257 205 aaPredicted RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 TTLL9Q3SXZ7 439 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 PARP15Q460N3 678 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ALFQ53S48 1182 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 FBXL22Q6P050 247 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 FAM43BQ6ZT52 329 aaPredicted RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 GAB3Q8WWW8 586 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 PPP3R2Q96LZ3 170 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 CYP2S1Q96SQ9 504 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 TUBA8Q9NY65 449 aaPredicted RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 DYTNA2CJ06 578 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 MAN1A2O60476 641 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 NIPSNAP2O75323 286 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 CD1DP15813 335 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ZNF182P17025 639 aaPredicted RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ZNF37AP17032 561 aaPredicted RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ACVRL1P37023 503 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 SLC26A3P40879 764 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 DGKQP52824 942 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 EEFSECP57772 596 aaKnown RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ARHGAP12Q8IWW6 846 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 OR10A6Q8NH74 314 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 IMP4Q96G21 291 aaKnown RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 TMEM165Q9HC07 324 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 NMRK2Q9NPI5 230 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 TRNAU1APQ9NX07 287 aaKnown RBP13.04□□□□□ -0.32
CUL4A-203ENST00000375441 ATP11BQ9Y2G3 1177 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 COQ6Q9Y2Z9 468 aa13.04□□□□□ -0.32
CUL4A-203ENST00000375441 COL11A2P13942 1736 aaPredicted RBP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 NUP205Q92621 2012 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 TCRBV3S1A0A5B6 114 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 GLTPD2A6NH11 291 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 PLOD2O00469 737 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 TLR5O60602 858 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 KERAO60938 352 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms