RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 MTM1Q13496 603 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 TIGD2Q4W5G0 525 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 TMEM17Q86X19 198 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 ERVK-5Q9HDB9 667 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 HOXA10P31260 410 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 OMPP47874 163 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 NDST2P52849 883 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 DDX53Q86TM3 631 aaKnown RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 SLC35B2Q8TB61 432 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 C11orf24Q96F05 449 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 PIDD1Q9HB75 910 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 RC3H2Q9HBD1 1191 aaKnown RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 TAS2R14Q9NYV8 317 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 KLQ9UEF7 1012 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 MAB21L2Q9Y586 359 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 KCNK1O00180 336 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 DNAJB13P59910 316 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 SRP54P61011 504 aaKnown RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 RPL38P63173 70 aaKnown RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 TCEAL5Q5H9L2 206 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 PYHIN1Q6K0P9 492 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 ADGRD2Q7Z7M1 963 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 P2RY11Q96G91 374 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 GTPBP2Q9BX10 602 aaKnown RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 ZBTB26Q9HCK0 441 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 ATP13A1Q9HD20 1204 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 GDAP2Q9NXN4 497 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 CNTN3Q9P232 1028 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 CYP7B1O75881 506 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 STOMP27105 288 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 VSTM1Q6UX27 236 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 TRIM48Q8IWZ4 208 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 MTRRQ9UBK8 725 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 TRIM3O75382 744 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 GALNT1Q10472 559 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 RNF180Q86T96 592 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 LPGAT1Q92604 370 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 TMEM169Q96HH4 297 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 CITED4Q96RK1 184 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 C3orf14Q9HBI5 128 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 TMA7Q9Y2S6 64 aaKnown RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 GTF2A2P52657 109 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 GDPGP1Q6ZNW5 385 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 TNS4Q8IZW8 715 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 SLC38A4Q969I6 547 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 NTAN1Q96AB6 310 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 PLA2G4CQ9UP65 541 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 H3BRB1 525 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 HIST1H2ABP04908 130 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 EPHB3P54753 998 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 FSTL4Q6MZW2 842 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 HIST3H2AQ7L7L0 130 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 PLD5Q8N7P1 536 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 HIST1H2ACQ93077 130 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 TUT1Q9H6E5 874 aaKnown RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 MOSPD1Q9UJG1 213 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 GIT1Q9Y2X7 761 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 LTN1O94822 1766 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 TFECO14948 347 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 PRKYO43930 277 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF311Q5JNZ3 666 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 FNBP1LQ5T0N5 605 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 DCST1Q5T197 706 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 MEDAGQ5VYS4 303 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 ZC3H7AQ8IWR0 971 aaKnown RBP10.12□□□□□ -0.79
PTCH1-204ENST00000375290 SLC13A3Q8WWT9 602 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 ISOC1Q96CN7 298 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF570Q96NI8 536 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 SLC30A2Q9BRI3 323 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 SLC25A51Q9H1U9 297 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF879B4DU55 563 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 KLHL18O94889 574 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 PRAMEF1O95521 474 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 MNDAP41218 407 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 MAGEA2P43356 314 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 CAMK1Q14012 370 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 GALNT13Q8IUC8 556 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ABCG2Q9UNQ0 655 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 FABP12A6NFH5 140 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 CILPO75339 1184 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 STK16O75716 305 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 SPATA31C1P0DKV0 1188 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 PBX3P40426 434 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 MARCKSL1P49006 195 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 KCTD19Q17RG1 926 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 FAM183BPQ6ZVS7 135 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 CHERPQ8IWX8 916 aaKnown RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ACAT2Q9BWD1 397 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF224Q9NZL3 707 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ACOX3O15254 700 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 EPCAMP16422 314 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 HSD17B2P37059 387 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 C10orf53Q8N6V4 93 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 TNFAIP8L1Q8WVP5 186 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 FRMD6Q96NE9 622 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 MEIS2O14770 477 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 FGF19O95750 216 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 RABL3Q5HYI8 236 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 SLC25A24Q6NUK1 477 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 INO80EQ8NBZ0 244 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms