RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 MBP02144 154 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 CRY1Q16526 586 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 FXNQ16595 210 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 GPAT2Q6NUI2 795 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 GFM1Q96RP9 751 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 TTLL2Q9BWV7 592 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 NIF3L1Q9GZT8 377 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 DUSP22Q9NRW4 184 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 POLHQ9Y253 713 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 LEPRP48357 1165 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 DAG1Q14118 895 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 BANPQ8N9N5 519 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 FCRL3Q96P31 734 aaPredicted RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 GAD1Q99259 594 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 TESPA1A2RU30 521 aaPredicted RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 TACSTD2P09758 323 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 RASGRP4Q8TDF6 673 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 MTG2Q9H4K7 406 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 LRRC4CQ9HCJ2 640 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 AXIN2Q9Y2T1 843 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 PCDHB12Q9Y5F1 795 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 PLIN3O60664 434 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 CAPN15O75808 1086 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 BTDP43251 543 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 PLD1Q13393 1074 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 NEPROQ6NW34 567 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 VN1R5Q7Z5H4 357 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 TEX19Q8NA77 164 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 SLC43A3Q8NBI5 491 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 OXER1Q8TDS5 423 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 LGR4Q9BXB1 951 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 ADAM33Q9BZ11 813 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 DPEP2Q9H4A9 486 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 NME7Q9Y5B8 376 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 UBA1P22314 1058 aaKnown RBP6.58□□□□□ -1.36
UBR4-204ENST00000375254 DNASE1P24855 282 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 CSHL1Q14406 222 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 PROSER3Q2NL68 480 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 TMEM31Q5JXX7 168 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 GPR180Q86V85 440 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 SERPINB11Q96P15 392 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 AGAP2Q99490 1192 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 KCNS3Q9BQ31 491 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 ASB4Q9Y574 426 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 RIMS2Q9UQ26 1411 aa6.58□□□□□ -1.36
UBR4-204ENST00000375254 CSTF1Q05048 431 aaKnown RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 ZNF367Q7RTV3 350 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ALYREFQ86V81 257 aaKnown RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 CDCA7Q9BWT1 371 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 RPF2Q9H7B2 306 aaKnown RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 ASB14A6NK59 587 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 HGFP14210 728 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 MZF1P28698 734 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 IL2P60568 153 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 SNTB2Q13425 540 aaKnown RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 KCTD19Q17RG1 926 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 FNBP1LQ5T0N5 605 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ATF7IP2Q5U623 682 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 PARP8Q8N3A8 854 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 CNOT9Q92600 299 aaKnown RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 MYO19Q96H55 970 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 TOR3AQ9H497 397 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 J3QRK9 145 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 TNFRSF11BO00300 401 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 MAPK9P45984 424 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 GABARAPL2P60520 117 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 FBXL8Q96CD0 374 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 BLOC1S4Q9NUP1 217 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 TMEM39AQ9NV64 488 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 SDHAF2Q9NX18 166 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 NACADO15069 1562 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 EFCAB5A4FU69 1503 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 CHRNA2Q15822 529 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 TRIM46Q7Z4K8 759 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 LACC1Q8IV20 430 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 NATD1Q8N6N6 113 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 SLCO2A1Q92959 643 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 GIMAP5Q96F15 307 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 MAPKAP1Q9BPZ7 522 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 MROQ9BYG7 248 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ANKRD34BA5PLL1 514 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 RFXANKO14593 260 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 TCEA1P23193 301 aaKnown RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 ALDH4A1P30038 563 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 SPAM1P38567 509 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 RAPSNQ13702 412 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 OR5H6Q8NGV6 325 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 HTR3CQ8WXA8 447 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 SNAPC3Q92966 411 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 PPIL3Q9H2H8 161 aaKnown RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 FAM50BQ9Y247 325 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 GBX2P52951 348 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 TAS2R43P59537 309 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 BTN1A1Q13410 526 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 FGD3Q5JSP0 725 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 LYPLAL1Q5VWZ2 237 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 SLFN11Q7Z7L1 901 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 PTCHD1Q96NR3 888 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 SAMD11Q96NU1 681 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms