RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 EVLQ9UI08 416 aaPredicted RBP20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 AP3D1O14617 1153 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 MAFO75444 373 aaPredicted RBP20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 ALOX12P18054 663 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 CYP2C18P33260 490 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 TAS2R39P59534 338 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 NFE2Q16621 373 aaPredicted RBP20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 NOL9Q5SY16 702 aaKnown RBP20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 ZNF544Q6NX49 715 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 SLC43A3Q8NBI5 491 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 CITED4Q96RK1 184 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 TTYH2Q9BSA4 534 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 FEM1AQ9BSK4 669 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 FAM49AQ9H0Q0 323 aaPredicted RBP20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 GTF2IRD1Q9UHL9 959 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 PCDHGB1Q9Y5G3 927 aa20.44■□□□□ 0.86
TMEFF1-201ENST00000374879 UNCXA6NJT0 531 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 G3V2T6 193 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 H3BMM5 538 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 UBXN8O00124 270 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 NFKBIEO00221 500 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 PRSS23O95084 383 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 ARL4AP40617 200 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 EFNA5P52803 228 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 GPLD1P80108 840 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 ARHGEF6Q15052 776 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 OTOP3Q7RTS5 596 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 ZDHHC13Q8IUH4 622 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 JPH3Q8WXH2 748 aaPredicted RBP20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 ZHX1-C8orf76Q96EF9 292 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 TRIM54Q9BYV2 358 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 FBXL12Q9NXK8 326 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 SLAMF8Q9P0V8 285 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 SPEF1Q9Y4P9 236 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 MTSS1O43312 755 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 DNAJB1P25685 340 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 MTHFRP42898 656 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 BCAT1P54687 386 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 Q5BKY6 102 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 DALRD3Q5D0E6 543 aaKnown RBP20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 NXNL2Q5VZ03 156 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 DCP1BQ8IZD4 617 aaKnown RBP20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 RNF149Q8NC42 400 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 REXO4Q9GZR2 422 aaKnown RBP20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 C6orf62Q9GZU0 229 aaPredicted RBP20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 STAP1Q9ULZ2 295 aa20.43■□□□□ 0.86
TMEFF1-201ENST00000374879 MN1Q10571 1320 aaPredicted RBP20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 CLCA4Q14CN2 919 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 SURF1Q15526 300 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 ZNF404Q494X3 552 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 FAM160B1Q5W0V3 765 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 LCLAT1Q6UWP7 414 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 LSMEM1Q8N8F7 131 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 CLEC4CQ8WTT0 213 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 ST6GAL2Q96JF0 529 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 GSTO2Q9H4Y5 243 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 SLC52A3Q9NQ40 469 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 TMPRSS4Q9NRS4 437 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 DPP3Q9NY33 737 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 DSEQ9UL01 958 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 PCDHGA10Q9Y5H3 936 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 MGAMO43451 1857 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 ZW10O43264 779 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 CD4P01730 458 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 PRKCBP05771 671 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 IMPDH1P20839 514 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 FMO4P31512 558 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 GGT5P36269 586 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 NDST1P52848 882 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 OR4D2P58180 307 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 GOLGA7BQ2TAP0 167 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 ZNF470Q6ECI4 717 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 ABI1Q8IZP0 508 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 LRRC71Q8N4P6 559 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 ESX1Q8N693 406 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 C1orf127Q8N9H9 656 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 CHST13Q8NET6 341 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 TRIM63Q969Q1 353 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 MAP6Q96JE9 813 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 IGSF5Q9NSI5 407 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 AASSQ9UDR5 926 aa20.42■□□□□ 0.86
TMEFF1-201ENST00000374879 LOC100130705A0A1B0GUX0 176 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 HAT1O14929 419 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 USP2O75604 605 aaPredicted RBP20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 FOXM1Q08050 763 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 LAMTOR4Q0VGL1 99 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 TRIM71Q2Q1W2 868 aaKnown RBP20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 TECRLQ5HYJ1 363 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 PAGE3Q5JUK9 113 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 GLYATQ6IB77 296 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 TUBA3EQ6PEY2 450 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 UBQLNLQ8IYU4 475 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 PARP16Q8N5Y8 322 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 KLRG1Q96E93 195 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 MLPHQ9BV36 600 aaPredicted RBP20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 UBP1Q9NZI7 540 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 NPAP1Q9NZP6 1156 aa20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 ZNF638Q14966 1978 aaKnown RBP20.41■□□□□ 0.86
TMEFF1-201ENST00000374879 H0Y626 953 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms