RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 STOML2Q9UJZ1 356 aa15.45■□□□□ 0.06
CCDC40-202ENST00000374876 CORO1CQ9ULV4 474 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-202ENST00000374876 COPG1Q9Y678 874 aaKnown RBP15.45■□□□□ 0.06
CCDC40-202ENST00000374876 A0A0D9SEW6 157 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 SDHDO14521 159 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 CD3EAPO15446 510 aaKnown RBP15.44■□□□□ 0.06
CCDC40-202ENST00000374876 BUD23O43709 281 aaKnown RBP15.44■□□□□ 0.06
CCDC40-202ENST00000374876 GOT2P00505 430 aaKnown RBP15.44■□□□□ 0.06
CCDC40-202ENST00000374876 SLC4A1P02730 911 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 SGSHP51688 502 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 SATB1Q01826 763 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 ACVR1Q04771 509 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 MESP2Q0VG99 397 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 UBXN2BQ14CS0 331 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 ZNF852Q6ZMS4 543 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 BNC2Q6ZN30 1099 aaPredicted RBP15.44■□□□□ 0.06
CCDC40-202ENST00000374876 CUZD1Q86UP6 607 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 FAM217AQ8IXS0 508 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 BRSK1Q8TDC3 778 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 MAGEH1Q9H213 219 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 ALG9Q9H6U8 611 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 PDFQ9HBH1 243 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 KANSL1LA0AUZ9 987 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 TRIM24O15164 1050 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 PI15O43692 258 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 RPP40O75818 363 aaKnown RBP15.44■□□□□ 0.06
CCDC40-202ENST00000374876 TYRP14679 529 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 GLULP15104 373 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 OPRD1P41143 372 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 GNA12Q03113 381 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 ART3Q13508 389 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 SDCCAG8Q86SQ7 713 aaPredicted RBP15.44■□□□□ 0.06
CCDC40-202ENST00000374876 PIM3Q86V86 326 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 DDI1Q8WTU0 396 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 TMA16Q96EY4 203 aaKnown RBP15.44■□□□□ 0.06
CCDC40-202ENST00000374876 ECSITQ9BQ95 431 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 VCX3BQ9H321 246 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 EFCAB1Q9HAE3 211 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 CLEC4EQ9ULY5 219 aa15.44■□□□□ 0.06
CCDC40-202ENST00000374876 CCDC162PA2VCL2 907 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 FAM170BA6NMN3 283 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 PIRTP0C851 137 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 PTPRCAPQ14761 206 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 C5orf22Q49AR2 442 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 CAPRIN2Q6IMN6 1127 aaKnown RBP15.43■□□□□ 0.06
CCDC40-202ENST00000374876 TMEM207Q6UWW9 146 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 CPXM2Q8N436 756 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 OR7D4Q8NG98 312 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 GPR150Q8NGU9 434 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 CDRT15Q96T59 188 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 SPON2Q9BUD6 331 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 CATSPERZQ9NTU4 200 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 MRGBPQ9NV56 204 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 SEPT3Q9UH03 358 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 A6NHS1 94 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 MAN2B1O00754 1011 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 CFLARO15519 480 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 SMIM24O75264 130 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 WISP3O95389 354 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-202ENST00000374876 NDST3O95803 873 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 LATS1O95835 1130 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 ENO3P13929 434 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-202ENST00000374876 IMPDH1P20839 514 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 FDXRP22570 491 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 HOXD9P28356 352 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-202ENST00000374876 PMLP29590 882 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 GALNT1Q10472 559 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-202ENST00000374876 CWF19L1Q69YN2 538 aaKnown RBP15.43■□□□□ 0.06
CCDC40-202ENST00000374876 ALG1LQ6GMV1 187 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 TMEM154Q6P9G4 183 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 RPS27LQ71UM5 84 aaKnown RBP15.43■□□□□ 0.06
CCDC40-202ENST00000374876 ISCA2Q86U28 154 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 PGAM4Q8N0Y7 254 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 OR13C4Q8NGS5 318 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 OR4L1Q8NH43 312 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 UCMAQ8WVF2 138 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 P2RY13Q9BPV8 354 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 TRMOQ9BU70 441 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 CINPQ9BW66 212 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-202ENST00000374876 LTB4R2Q9NPC1 389 aa15.43■□□□□ 0.06
CCDC40-202ENST00000374876 UBA2Q9UBT2 640 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-202ENST00000374876 ANTXRLA6NF34 631 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 GFRA2O00451 464 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 HOXC11O43248 304 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-202ENST00000374876 PENKP01210 267 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-202ENST00000374876 DCNP07585 359 aaKnown RBP15.42■□□□□ 0.06
CCDC40-202ENST00000374876 CDH4P55283 916 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 OXCT1P55809 520 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 RPS24P62847 133 aaKnown RBP15.42■□□□□ 0.06
CCDC40-202ENST00000374876 CDC16Q13042 620 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 KBTBD6Q86V97 674 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 SFTPA1Q8IWL2 248 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 PELI3Q8N2H9 469 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 RYBPQ8N488 228 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-202ENST00000374876 OR52K2Q8NGK3 314 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 MGME1Q9BQP7 344 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 VCXQ9H320 206 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 RETREG1Q9H6L5 497 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 WDR41Q9HAD4 459 aa15.42■□□□□ 0.06
CCDC40-202ENST00000374876 MEAF6Q9HAF1 191 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms