RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ZNF280AP59817 542 aaPredicted RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 DLG1Q12959 904 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 AADATQ8N5Z0 425 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 PPCDCQ96CD2 204 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 PCED1BQ96HM7 432 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 C5orf34Q96MH7 638 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 SASH3O75995 380 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 NFATC1O95644 943 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 IGFALSP35858 605 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 MANFP55145 182 aaKnown RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 GDF6Q6KF10 455 aaPredicted RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 TRPV1Q8NER1 839 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 PPP1R14BQ96C90 147 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 TOR3AQ9H497 397 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 TMEM165Q9HC07 324 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 ACSS2Q9NR19 701 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 OSER1Q9NX31 292 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 CKLFQ9UBR5 152 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 PHF24Q9UPV7 400 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 NPEPPSL1A6NEC2 478 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 RSL1D1O76021 490 aaKnown RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 PTPN2P17706 415 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 LMO2P25791 158 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 CTSKP43235 329 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 TTPAP49638 278 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 ATXN1P54253 815 aaKnown RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 CD101Q93033 1021 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 AARSD1Q9BTE6 412 aaKnown RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 CLK4Q9HAZ1 481 aaKnown RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 FKBP14Q9NWM8 211 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 R3HDM2Q9Y2K5 976 aaKnown RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 CPQQ9Y646 472 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 E9PAM4 449 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 MAGEC1O60732 1142 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 FGF19O95750 216 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 LPOP22079 712 aaPredicted RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 CLCN5P51795 746 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 CDK18Q07002 472 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 EIF1ADQ8N9N8 165 aaKnown RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 MCFD2Q8NI22 146 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 CPXM1Q96SM3 734 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 IQCF5A8MTL0 148 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 PDE2AO00408 941 aaPredicted RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 NR2F6P10588 404 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 GJA1P17302 382 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 BNC1Q01954 994 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 CBX2Q14781 532 aaPredicted RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 FAM129CQ86XR2 697 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 SLC4A11Q8NBS3 891 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 FEM1CQ96JP0 617 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 AGO3Q9H9G7 860 aaKnown RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 NECTIN3Q9NQS3 549 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 TMLHEQ9NVH6 421 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 ADGRE2Q9UHX3 823 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 MAFBQ9Y5Q3 323 aaPredicted RBP14.23□□□□□ -0.13
TRAF1-201ENST00000373887 MAPK8P45983 427 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 MTTPP55157 894 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 KAT2AQ92830 837 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 SIPA1Q96FS4 1042 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 BNIP2Q12982 314 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 SLC25A52Q3SY17 297 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 ZFP69Q49AA0 526 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 LPCAT4Q643R3 524 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 ZNF730Q6ZMV8 503 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 GK5Q6ZS86 529 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 UBE2J2Q8N2K1 259 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 KREMEN2Q8NCW0 462 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 BRINP2Q9C0B6 783 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 TRNAU1APQ9NX07 287 aaKnown RBP14.22□□□□□ -0.13
TRAF1-201ENST00000373887 SLC31A1O15431 190 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 LRIG2O94898 1065 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 OTCP00480 354 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 ILF2Q12905 390 aaKnown RBP14.22□□□□□ -0.13
TRAF1-201ENST00000373887 SLC5A9Q2M3M2 681 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 CERCAMQ5T4B2 595 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 GALNT18Q6P9A2 607 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 PHYKPLQ8IUZ5 450 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 GPR65Q8IYL9 337 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 OR4L1Q8NH43 312 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 NKD1Q969G9 470 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 RIPOR3Q96MK2 946 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 GAL3ST1Q99999 423 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 CNPPD1Q9BV87 410 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.22□□□□□ -0.13
TRAF1-201ENST00000373887 UNC5CO95185 931 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 DHFRP00374 187 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 ITPKAP23677 461 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 RP9Q8TA86 221 aaKnown RBP14.22□□□□□ -0.13
TRAF1-201ENST00000373887 DHRS1Q96LJ7 313 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 GFM1Q96RP9 751 aaKnown RBP14.22□□□□□ -0.13
TRAF1-201ENST00000373887 KCTD15Q96SI1 283 aaPredicted RBP14.22□□□□□ -0.13
TRAF1-201ENST00000373887 OSBPL11Q9BXB4 747 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 KCNN2Q9H2S1 579 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.22□□□□□ -0.13
TRAF1-201ENST00000373887 DERAQ9Y315 318 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 CCNKO75909 580 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 SAGP10523 405 aaPredicted RBP14.22□□□□□ -0.13
TRAF1-201ENST00000373887 TACR2P21452 398 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 CDKL1Q00532 357 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms