RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 PPFIA2O75334 1257 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 EIF2S3P41091 472 aaKnown RBP22.39■■□□□ 1.17
COL9A2-201ENST00000372736 FASLGP48023 281 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 INHBCP55103 352 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 OR1D5P58170 312 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 MSLNQ13421 630 aaPredicted RBP22.39■■□□□ 1.17
COL9A2-201ENST00000372736 PTPRCAPQ14761 206 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 CHRNA6Q15825 494 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 SEL1L2Q5TEA6 688 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 MEI1Q5TIA1 1274 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 KCTD11Q693B1 232 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 DENND5AQ6IQ26 1287 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 ARHGEF18Q6ZSZ5 1173 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 WDR36Q8NI36 951 aaKnown RBP22.39■■□□□ 1.17
COL9A2-201ENST00000372736 FGF11Q92914 225 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 ZNF578Q96N58 590 aaPredicted RBP22.39■■□□□ 1.17
COL9A2-201ENST00000372736 DCBLD2Q96PD2 775 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 TBL1YQ9BQ87 522 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 LZTFL1Q9NQ48 299 aa22.39■■□□□ 1.17
COL9A2-201ENST00000372736 GLYATL1P3A0A0U1RQE8 302 aa22.38■■□□□ 1.17
COL9A2-201ENST00000372736 VEGFDO43915 354 aa22.38■■□□□ 1.17
COL9A2-201ENST00000372736 CA5AP35218 305 aa22.38■■□□□ 1.17
COL9A2-201ENST00000372736 GPR3P46089 330 aa22.38■■□□□ 1.17
COL9A2-201ENST00000372736 CLCNKAP51800 687 aa22.38■■□□□ 1.17
COL9A2-201ENST00000372736 ZFP36L1Q07352 338 aaKnown RBP22.38■■□□□ 1.17
COL9A2-201ENST00000372736 SPARCL1Q14515 664 aa22.38■■□□□ 1.17
COL9A2-201ENST00000372736 TAF1AQ15573 450 aaPredicted RBP22.38■■□□□ 1.17
COL9A2-201ENST00000372736 C19orf48Q6RUI8 117 aa22.38■■□□□ 1.17
COL9A2-201ENST00000372736 SLC13A5Q86YT5 568 aaPredicted RBP22.38■■□□□ 1.17
COL9A2-201ENST00000372736 ZNF547Q8IVP9 402 aa22.38■■□□□ 1.17
COL9A2-201ENST00000372736 SLITRK4Q8IW52 837 aa22.38■■□□□ 1.17
COL9A2-201ENST00000372736 TMEM74Q96NL1 305 aa22.38■■□□□ 1.17
COL9A2-201ENST00000372736 EPB41L5Q9HCM4 733 aa22.38■■□□□ 1.17
COL9A2-201ENST00000372736 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.38■■□□□ 1.17
COL9A2-201ENST00000372736 PRR19A6NJB7 356 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 STX7O15400 261 aaKnown RBP22.37■■□□□ 1.17
COL9A2-201ENST00000372736 METTL18O95568 372 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 F3P13726 295 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 ALDH4A1P30038 563 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 ERVPABLB-1P60509 514 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 BIRC2Q13490 618 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 OASLQ15646 514 aaKnown RBP22.37■■□□□ 1.17
COL9A2-201ENST00000372736 PARP6Q2NL67 630 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 PLA2G4EQ3MJ16 856 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 AMZ1Q400G9 498 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 MAP9Q49MG5 647 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.37■■□□□ 1.17
COL9A2-201ENST00000372736 LRRTM4Q86VH4 590 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 HNRNPLLQ8WVV9 542 aaKnown RBP22.37■■□□□ 1.17
COL9A2-201ENST00000372736 RTP4Q96DX8 246 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 SLC46A1Q96NT5 459 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 ALS2CR12Q96Q35 445 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 TIMM29Q9BSF4 260 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 STRADBQ9C0K7 418 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 ARNT2Q9HBZ2 717 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 KLC4Q9NSK0 619 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 SMOXQ9NWM0 555 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 SLC23A2Q9UGH3 650 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 KCTD3Q9Y597 815 aa22.37■■□□□ 1.17
COL9A2-201ENST00000372736 TRBV23OR9-2A0A075B6M9 112 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 TMX2-CTNND1H3BSU7 103 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 KMOO15229 486 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 LIASO43766 372 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 UGT1A9O60656 530 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 CDK14O94921 469 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 CPNE6O95741 557 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 UGT1A6P19224 532 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 LPOP22079 712 aaPredicted RBP22.36■■□□□ 1.17
COL9A2-201ENST00000372736 UGT1A1P22309 533 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 UGT1A4P22310 534 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 CD1CP29017 333 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 UGT1A3P35503 534 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 UGT1A5P35504 534 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 EIF3IQ13347 325 aaKnown RBP22.36■■□□□ 1.17
COL9A2-201ENST00000372736 ITGA9Q13797 1035 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 RPS6KA1Q15418 735 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 COL28A1Q2UY09 1125 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 P3H1Q32P28 736 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 IYDQ6PHW0 289 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 DDHD1Q8NEL9 900 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 OR4K2Q8NGD2 314 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 GDAP1Q8TB36 358 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 BRSK1Q8TDC3 778 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 NUDT22Q9BRQ3 303 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 UGT1A7Q9HAW7 530 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 UGT1A10Q9HAW8 530 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 UGT1A8Q9HAW9 530 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 RDH14Q9HBH5 336 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 THSD1Q9NS62 852 aa22.36■■□□□ 1.17
COL9A2-201ENST00000372736 IGHV1OR21-1A0A087WYE8 117 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 C2orf81A6NN90 581 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 CDRT15L2A8MXV6 281 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 PLD2O14939 933 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 SNX2O60749 519 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 PRAMEF1O95521 474 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 ZNF7P17097 686 aaPredicted RBP22.35■■□□□ 1.17
COL9A2-201ENST00000372736 CSF2RBP32927 897 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 ZNF140P52738 457 aaPredicted RBP22.35■■□□□ 1.17
COL9A2-201ENST00000372736 PCBP4P57723 403 aaKnown RBP22.35■■□□□ 1.17
COL9A2-201ENST00000372736 TMEM115Q12893 351 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms