RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 QKIQ96PU8 341 aaKnown RBP eCLIP18.67■□□□□ 0.58
TMEM53-201ENST00000372235 NUDT22Q9BRQ3 303 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 TIMM29Q9BSF4 260 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 OR2AG1Q9H205 316 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 UCK1Q9HA47 277 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 SAE1Q9UBE0 346 aaPredicted RBP18.67■□□□□ 0.58
TMEM53-201ENST00000372235 PKP3Q9Y446 797 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 PCDHGA3Q9Y5H0 932 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 UNC13CQ8NB66 2214 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 PMS2P1A4D2B8 440 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.66■□□□□ 0.58
TMEM53-201ENST00000372235 STMND1H3BQB6 276 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 CDK14O94921 469 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 SLC4A1P02730 911 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 THRAP10827 490 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 PECAM1P16284 738 aaPredicted RBP18.66■□□□□ 0.58
TMEM53-201ENST00000372235 ZNF8P17098 575 aaPredicted RBP18.66■□□□□ 0.58
TMEM53-201ENST00000372235 BPIP17213 487 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 ITIH1P19827 911 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 CTNNA1P35221 906 aaKnown RBP18.66■□□□□ 0.58
TMEM53-201ENST00000372235 ATP1A2P50993 1020 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 WNT3AP56704 352 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 ITGA9Q13797 1035 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 INSCQ1MX18 579 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 RBM12BQ8IXT5 1001 aaKnown RBP18.66■□□□□ 0.58
TMEM53-201ENST00000372235 TEFMQ96QE5 360 aaKnown RBP18.66■□□□□ 0.58
TMEM53-201ENST00000372235 DDA1Q9BW61 102 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 PDP2Q9P2J9 529 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 TBC1D29Q9UFV1 150 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 RSPH14Q9UHP6 348 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 KCNK6Q9Y257 313 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 AAR2Q9Y312 384 aaKnown RBP18.66■□□□□ 0.58
TMEM53-201ENST00000372235 PCDHA3Q9Y5H8 950 aa18.66■□□□□ 0.58
TMEM53-201ENST00000372235 PRAMEF33A0A0G2JMD5 474 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 B4E171 279 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 H7C0C1 242 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 SNX2O60749 519 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 PRAMEF10O60809 474 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 TJP3O95049 919 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 PIRTP0C851 137 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 XRCC1P18887 633 aaPredicted RBP18.65■□□□□ 0.58
TMEM53-201ENST00000372235 NFKB1P19838 968 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 FECHP22830 423 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 PTPN7P35236 360 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 SPAM1P38567 509 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 TSPAN7P41732 249 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 ATP5OP48047 213 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 ZNF75DP51815 510 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 GEMP55040 296 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 RWDD2BP57060 319 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 PRPSAP1Q14558 356 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 C16orf72Q14CZ0 275 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 SLC1A5Q15758 541 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 MANEAQ5SRI9 462 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 ZNF574Q6ZN55 896 aaPredicted RBP18.65■□□□□ 0.58
TMEM53-201ENST00000372235 TMPRSS9Q7Z410 1059 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 GLT6D1Q7Z4J2 308 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 ADGRG6Q86SQ4 1221 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 PLXDC1Q8IUK5 500 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 CDKL3Q8IVW4 592 aaPredicted RBP18.65■□□□□ 0.58
TMEM53-201ENST00000372235 ZNF567Q8N184 647 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 ZPBPQ9BS86 351 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 OSGEPL1Q9H4B0 414 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 KLC4Q9NSK0 619 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 UBP1Q9NZI7 540 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 CPNE7Q9UBL6 633 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 PRKAB1Q9Y478 270 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 ADGRG1Q9Y653 693 aa18.65■□□□□ 0.58
TMEM53-201ENST00000372235 KLHL33A6NCF5 533 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 A6NCN8 305 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 LILRA5A6NI73 299 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 ZNF7P17097 686 aaPredicted RBP18.64■□□□□ 0.57
TMEM53-201ENST00000372235 CD68P34810 354 aaPredicted RBP18.64■□□□□ 0.57
TMEM53-201ENST00000372235 PDE1BQ01064 536 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 LDLRAP1Q5SW96 308 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 DCAF12Q5T6F0 453 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 NKAIN2Q5VXU1 208 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 KDELC1Q6UW63 502 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 WASH2PQ6VEQ5 465 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 TRIM48Q8IWZ4 208 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 SYCE1Q8N0S2 351 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 GDAP1Q8TB36 358 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 WASH6PQ9NQA3 447 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 POT1Q9NUX5 634 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 WDR70Q9NW82 654 aa18.64■□□□□ 0.57
TMEM53-201ENST00000372235 DNMT3AQ9Y6K1 912 aaPredicted RBP18.64■□□□□ 0.57
TMEM53-201ENST00000372235 ZFYVE26Q68DK2 2539 aa18.63■□□□□ 0.57
TMEM53-201ENST00000372235 ITPR1Q14643 2758 aa18.63■□□□□ 0.57
TMEM53-201ENST00000372235 TRBV23OR9-2A0A075B6M9 112 aa18.63■□□□□ 0.57
TMEM53-201ENST00000372235 C9orf172C9J069 976 aa18.63■□□□□ 0.57
TMEM53-201ENST00000372235 VIPP01282 170 aa18.63■□□□□ 0.57
TMEM53-201ENST00000372235 IDSP22304 550 aa18.63■□□□□ 0.57
TMEM53-201ENST00000372235 CFHR1Q03591 330 aa18.63■□□□□ 0.57
TMEM53-201ENST00000372235 TMEM115Q12893 351 aaPredicted RBP18.63■□□□□ 0.57
TMEM53-201ENST00000372235 NFATC2Q13469 925 aa18.63■□□□□ 0.57
TMEM53-201ENST00000372235 NOMO1Q15155 1222 aa18.63■□□□□ 0.57
TMEM53-201ENST00000372235 SIRPB2Q5JXA9 342 aa18.63■□□□□ 0.57
TMEM53-201ENST00000372235 B4GALNT4Q76KP1 1039 aa18.63■□□□□ 0.57
TMEM53-201ENST00000372235 DTX1Q86Y01 620 aa18.63■□□□□ 0.57
TMEM53-201ENST00000372235 RCBTB1Q8NDN9 531 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms