RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 CA4P22748 312 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 CD68P34810 354 aaPredicted RBP12.98□□□□□ -0.33
RPF1-201ENST00000370654 SLC19A1P41440 591 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 ATP1A2P50993 1020 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 SEPT7Q16181 437 aaKnown RBP12.98□□□□□ -0.33
RPF1-201ENST00000370654 DCAF12Q5T6F0 453 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 ATP1A1-AS1Q5TC04 95 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 MFSD7Q6UXD7 560 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 SLC9B2Q86UD5 537 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 NT5DC3Q86UY8 548 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 RFX6Q8HWS3 928 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 ZSCAN1Q8NBB4 408 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 OR8K1Q8NGG5 319 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 CCHCR1Q8TD31 782 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 GLYATL1Q969I3 302 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 DPYSL5Q9BPU6 564 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 ADGRE3Q9BY15 652 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 FAM117AQ9C073 453 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 GOLPH3Q9H4A6 298 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 OSGEPL1Q9H4B0 414 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 RMI1Q9H9A7 625 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 TRIM39Q9HCM9 518 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 DNAJC16Q9Y2G8 782 aa12.98□□□□□ -0.33
RPF1-201ENST00000370654 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.98□□□□□ -0.334e-6■■■□□ 15.9
RPF1-201ENST00000370654 SSU72P8A0A1W2PR75 194 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 GPR39O43194 453 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 PMPCBO75439 489 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 PECAM1P16284 738 aaPredicted RBP12.97□□□□□ -0.33
RPF1-201ENST00000370654 ZNF28P17035 718 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 TYRP1P17643 537 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 PTPN3P26045 913 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 LEPRP48357 1165 aaKnown RBP12.97□□□□□ -0.33
RPF1-201ENST00000370654 CDK18Q07002 472 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 ZNF569Q5MCW4 686 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 PTRH1Q86Y79 214 aaKnown RBP12.97□□□□□ -0.33
RPF1-201ENST00000370654 TRAM1L1Q8N609 369 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 HERPUD2Q9BSE4 406 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 SLC25A51Q9H1U9 297 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 CLMPQ9H6B4 373 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 NHEJ1Q9H9Q4 299 aaPredicted RBP12.97□□□□□ -0.33
RPF1-201ENST00000370654 GLOD4Q9HC38 313 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 MAGEE1Q9HCI5 957 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 ABHD10Q9NUJ1 306 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 GEMIN8Q9NWZ8 242 aaKnown RBP12.97□□□□□ -0.33
RPF1-201ENST00000370654 SIDT1Q9NXL6 827 aaKnown RBP12.97□□□□□ -0.33
RPF1-201ENST00000370654 TRIM10Q9UDY6 481 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 TFR2Q9UP52 801 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 WDR37Q9Y2I8 494 aa12.97□□□□□ -0.33
RPF1-201ENST00000370654 MRPS18BQ9Y676 258 aaKnown RBP12.97□□□□□ -0.33
RPF1-201ENST00000370654 TLN1Q9Y490 2541 aaKnown RBP12.97□□□□□ -0.33
RPF1-201ENST00000370654 KIR2DS5A0A0G2JLQ3 304 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 A0A0G2JNG1 304 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 ZNF487B1APH4 448 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 KIR2DS3K7RE56 304 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 KIF1CO43896 1103 aaKnown RBP12.96□□□□□ -0.33
RPF1-201ENST00000370654 AKR1B10O60218 316 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 MTA2O94776 668 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 ZNF7P17097 686 aaPredicted RBP12.96□□□□□ -0.33
RPF1-201ENST00000370654 COMTP21964 271 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 F8A1P23610 371 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 RPL10P27635 214 aaKnown RBP12.96□□□□□ -0.33
RPF1-201ENST00000370654 CHRNA4P43681 627 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 CLCNKAP51800 687 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 EPHA4P54764 986 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 DRG2P55039 364 aaKnown RBP12.96□□□□□ -0.33
RPF1-201ENST00000370654 POLE2P56282 527 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 DCDC1P59894 354 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 SH3BP2P78314 561 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 KCNC4Q03721 635 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 WASHC5Q12768 1159 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 KIR2DS5Q14953 304 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 PDK1Q15118 436 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 PRKD1Q15139 912 aaPredicted RBP12.96□□□□□ -0.33
RPF1-201ENST00000370654 ATP13A5Q4VNC0 1218 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 TEX44Q53QW1 395 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 KDELC1Q6UW63 502 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 C11orf96Q7Z7L8 435 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 VSTM4Q8IW00 320 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 CCDC112Q8NEF3 446 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.96□□□□□ -0.33
RPF1-201ENST00000370654 NAT14Q8WUY8 206 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 ZNF830Q96NB3 372 aaPredicted RBP12.96□□□□□ -0.33
RPF1-201ENST00000370654 ASPSCR1Q9BZE9 553 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 GPR63Q9BZJ6 419 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 DEF6Q9H4E7 631 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 FBXO8Q9NRD0 319 aa12.96□□□□□ -0.33
RPF1-201ENST00000370654 HEMK1Q9Y5R4 338 aaPredicted RBP12.96□□□□□ -0.33
RPF1-201ENST00000370654 MN1Q10571 1320 aaPredicted RBP12.96□□□□□ -0.34
RPF1-201ENST00000370654 LILRA5A6NI73 299 aa12.95□□□□□ -0.34
RPF1-201ENST00000370654 OR52A4PA6NMU1 304 aa12.95□□□□□ -0.34
RPF1-201ENST00000370654 BUD23O43709 281 aaKnown RBP12.95□□□□□ -0.34
RPF1-201ENST00000370654 STK17BO94768 372 aa12.95□□□□□ -0.34
RPF1-201ENST00000370654 NDST3O95803 873 aa12.95□□□□□ -0.34
RPF1-201ENST00000370654 DLGAP3O95886 979 aa12.95□□□□□ -0.34
RPF1-201ENST00000370654 C9P02748 559 aa12.95□□□□□ -0.34
RPF1-201ENST00000370654 PRKAR1AP10644 381 aa12.95□□□□□ -0.34
RPF1-201ENST00000370654 XRCC1P18887 633 aaPredicted RBP12.95□□□□□ -0.34
RPF1-201ENST00000370654 OAS2P29728 719 aaKnown RBP12.95□□□□□ -0.34
RPF1-201ENST00000370654 ARHGAP25P42331 645 aa12.95□□□□□ -0.34
RPF1-201ENST00000370654 CDKN2BP42772 138 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms