RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SCAIQ8N9R8 606 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 TEX47Q8TBZ9 253 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 C17orf50Q8WW18 174 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 SPATA5L1Q9BVQ7 753 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 ZDHHC6Q9H6R6 413 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 IPPKQ9H8X2 491 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 XPNPEP1Q9NQW7 623 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 AASDHPPTQ9NRN7 309 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 PDHXO00330 501 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 KPNA5O15131 536 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 SLC22A1O15245 554 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 PRG2P13727 222 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 ARL4DP49703 201 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 TSTD2Q5T7W7 516 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 IQSEC1Q6DN90 963 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 NEK5Q6P3R8 708 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 EEF1AKMT1Q8WVE0 214 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 PDZD7Q9H5P4 517 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 ZDHHC2Q9UIJ5 367 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 MAFBQ9Y5Q3 323 aaPredicted RBP15.81■□□□□ 0.12
COL17A1-202ENST00000369733 FPGTO14772 594 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 ARPC2O15144 300 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 DHFRP00374 187 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 URODP06132 367 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 UGT2B4P06133 528 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 NR2F1P10589 423 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 TCEAL1Q15170 157 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 CPTPQ5TA50 214 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 SDHAF4Q5VUM1 108 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 UBE2E3Q969T4 207 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 DMRTB1Q96MA1 342 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 TEFMQ96QE5 360 aaKnown RBP15.81■□□□□ 0.12
COL17A1-202ENST00000369733 CCDC106Q9BWC9 280 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 GOLGA2P5Q9HBQ8 144 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 ADARB2Q9NS39 739 aaKnown RBP15.81■□□□□ 0.12
COL17A1-202ENST00000369733 DNMT3LQ9UJW3 386 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 EFCAB9A8MZ26 197 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 GPR25O00155 361 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 BCAS2O75934 225 aaPredicted RBP15.81■□□□□ 0.12
COL17A1-202ENST00000369733 OR4F21O95013 312 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 CCNIQ14094 377 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 SH3D19Q5HYK7 790 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 C16orf62Q7Z3J2 963 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 R3HCC1LQ7Z5L2 792 aaKnown RBP15.81■□□□□ 0.12
COL17A1-202ENST00000369733 DENND1CQ8IV53 801 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 KCNS3Q9BQ31 491 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 C2orf49Q9BVC5 232 aaPredicted RBP15.81■□□□□ 0.12
COL17A1-202ENST00000369733 NEMP2A6NFY4 417 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 TRBC1P01850 177 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 LPPQ93052 612 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 SLC7A6OSQ96CW6 309 aaPredicted RBP15.8■□□□□ 0.12
COL17A1-202ENST00000369733 RIPK3Q9Y572 518 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 RPLP0P05388 317 aaKnown RBP15.8■□□□□ 0.12
COL17A1-202ENST00000369733 SDC2P34741 201 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 PFKPQ01813 784 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 OGDHQ02218 1023 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 DSC2Q02487 901 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 SLC25A11Q02978 314 aaKnown RBP15.8■□□□□ 0.12
COL17A1-202ENST00000369733 ZNF829Q3KNS6 432 aaPredicted RBP15.8■□□□□ 0.12
COL17A1-202ENST00000369733 ASRGL1Q7L266 308 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 ITIH5Q86UX2 942 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 GPR20Q99678 358 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 NUDT4Q9NZJ9 180 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 SLC9A8Q9Y2E8 581 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 F7P08709 466 aaPredicted RBP15.8■□□□□ 0.12
COL17A1-202ENST00000369733 COL6A1P12109 1028 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 USP43Q70EL4 1123 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 ZZZ3Q8IYH5 903 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 OR5K1Q8NHB7 308 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 HBEGFQ99075 208 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 ADAM2Q99965 735 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 SLC39A3Q9BRY0 314 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 CPA4Q9UI42 421 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 TMEM233B4DJY2 109 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 hCG_2039718K7EN88 272 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 MATN3O15232 486 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 CKBP12277 381 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 FMO3P31513 532 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 ARPC4P59998 168 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 TMPRSS11AQ6ZMR5 421 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 CXXC5Q7LFL8 322 aaKnown RBP15.8■□□□□ 0.12
COL17A1-202ENST00000369733 RASAL3Q86YV0 1011 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 GPR65Q8IYL9 337 aa15.8■□□□□ 0.12
COL17A1-202ENST00000369733 FAM124BQ9H5Z6 455 aaPredicted RBP15.8■□□□□ 0.12
COL17A1-202ENST00000369733 MYH8P13535 1937 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 CDH1P12830 882 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 GPD2P43304 727 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 RHDQ02161 417 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 PCLAFQ15004 111 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 TRAPPC5Q8IUR0 188 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 ZDHHC21Q8IVQ6 265 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 SLC25A51Q9H1U9 297 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 PSME2Q9UL46 239 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 RAB23Q9ULC3 237 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.79■□□□□ 0.12
COL17A1-202ENST00000369733 CES1P23141 567 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 MOGQ16653 247 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 HSDL1Q3SXM5 330 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 IGDCC3Q8IVU1 814 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 SMYD1Q8NB12 490 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms