RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CCDC63Q8NA47 563 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 HEXDCQ8WVB3 486 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 AP2M1Q96CW1 435 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 VPS35Q96QK1 796 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 COPS8Q99627 209 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 GPR21Q99679 349 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 MECRQ9BV79 373 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 SIRPGQ9P1W8 387 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 TSPAN6O43657 245 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 RECQL5O94762 991 aaPredicted RBP23.65■■□□□ 1.38
SNX3-203ENST00000368979 PYGLP06737 847 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 KPNA2P52292 529 aaKnown RBP23.65■■□□□ 1.38
SNX3-203ENST00000368979 B4GALNT1Q00973 533 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 ZP2Q05996 745 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 PCLAFQ15004 111 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 FAM83EQ2M2I3 478 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 GPRC6AQ5T6X5 926 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 MACC1Q6ZN28 852 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 LRRC34Q8IZ02 419 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 FSTL5Q8N475 847 aaPredicted RBP23.65■■□□□ 1.38
SNX3-203ENST00000368979 SPATA6LQ8N4H0 392 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 LRRC8CQ8TDW0 803 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 ZNF75CPQ92670 426 aaPredicted RBP23.65■■□□□ 1.38
SNX3-203ENST00000368979 NUS1Q96E22 293 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 GALPQ9UBC7 116 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 COPG2Q9UBF2 871 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 MMP17Q9ULZ9 603 aa23.65■■□□□ 1.38
SNX3-203ENST00000368979 NDRG2Q9UN36 371 aaKnown RBP23.65■■□□□ 1.38
SNX3-203ENST00000368979 H3BMM5 538 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 DNTTP04053 509 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 SBK3P0C264 359 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 GLRBP48167 497 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 AGAP9Q5VTM2 703 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 DDHD1Q8NEL9 900 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 GIMAP7Q8NHV1 300 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 MAFAQ8NHW3 353 aaPredicted RBP23.64■■□□□ 1.38
SNX3-203ENST00000368979 CD200R1Q8TD46 325 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 FAM136AQ96C01 138 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 SLC30A3Q99726 388 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 SLC6A17Q9H1V8 727 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 SYTL2Q9HCH5 934 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 XPR1Q9UBH6 696 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 MID2Q9UJV3 735 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 SCML1Q9UN30 329 aa23.64■■□□□ 1.38
SNX3-203ENST00000368979 TARM1B6A8C7 271 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 LZTS3O60299 673 aaPredicted RBP23.64■■□□□ 1.37
SNX3-203ENST00000368979 RNASEH2AO75792 299 aaKnown RBP23.64■■□□□ 1.37
SNX3-203ENST00000368979 BGNP21810 368 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 DRD4P21917 467 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 ALDH3A1P30838 453 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 CLCN7P51798 805 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 PRKCQQ04759 706 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 DPTQ07507 201 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 TECRLQ5HYJ1 363 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 PTRHD1Q6GMV3 140 aaKnown RBP23.64■■□□□ 1.37
SNX3-203ENST00000368979 PAQR3Q6TCH7 311 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 TMEM92Q6UXU6 159 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 ZNF852Q6ZMS4 543 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 NUDCD3Q8IVD9 361 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 ZNF687Q8N1G0 1237 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 CLDN19Q8N6F1 224 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 RDH11Q8TC12 318 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 BTN2A2Q8WVV5 523 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 RABEP2Q9H5N1 569 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 MANSC1Q9H8J5 431 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 TRMT6Q9UJA5 497 aaKnown RBP23.64■■□□□ 1.37
SNX3-203ENST00000368979 SORCS3Q9UPU3 1222 aa23.64■■□□□ 1.37
SNX3-203ENST00000368979 IQCF5A8MTL0 148 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 E5RI56 91 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 G3V2L1 256 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 TK2O00142 265 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 KLF11O14901 512 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 FAM107AO95990 144 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 SOD1P00441 154 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 VIMP08670 466 aaKnown RBP23.63■■□□□ 1.37
SNX3-203ENST00000368979 CPA3P15088 417 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 CHRM3P20309 590 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 SKIV2L2P42285 1042 aaKnown RBP23.63■■□□□ 1.37
SNX3-203ENST00000368979 ZBTB16Q05516 673 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 UGT3A1Q6NUS8 523 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 NLRP8Q86W28 1048 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 TRIM42Q8IWZ5 723 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 SIDT2Q8NBJ9 832 aaKnown RBP23.63■■□□□ 1.37
SNX3-203ENST00000368979 RAB3IL1Q8TBN0 382 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 LKAAEAR1Q8TD35 194 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 SCYL1Q96KG9 808 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 CCT8L2Q96SF2 557 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 UNKQ9C0B0 810 aaKnown RBP23.63■■□□□ 1.37
SNX3-203ENST00000368979 MRPL46Q9H2W6 279 aaKnown RBP23.63■■□□□ 1.37
SNX3-203ENST00000368979 ARHGEF3Q9NR81 526 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 FBXL12Q9NXK8 326 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 CA14Q9ULX7 337 aa23.63■■□□□ 1.37
SNX3-203ENST00000368979 F5P12259 2224 aa23.62■■□□□ 1.37
SNX3-203ENST00000368979 CHRNB1P11230 501 aa23.62■■□□□ 1.37
SNX3-203ENST00000368979 CD1DP15813 335 aa23.62■■□□□ 1.37
SNX3-203ENST00000368979 ACAP2Q15057 778 aa23.62■■□□□ 1.37
SNX3-203ENST00000368979 KLC3Q6P597 504 aa23.62■■□□□ 1.37
SNX3-203ENST00000368979 BCAS4Q8TDM0 211 aa23.62■■□□□ 1.37
SNX3-203ENST00000368979 NAT14Q8WUY8 206 aa23.62■■□□□ 1.37
SNX3-203ENST00000368979 GLYATL1Q969I3 302 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms