RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 CSNK2A3Q8NEV1 391 aa4.88□□□□□ -1.63
RPL39-201ENST00000361575 C16orf52Q8NHV5 167 aa4.88□□□□□ -1.63
RPL39-201ENST00000361575 ORAI1Q96D31 301 aa4.88□□□□□ -1.63
RPL39-201ENST00000361575 KRCC1Q9NPI7 259 aaPredicted RBP4.88□□□□□ -1.63
RPL39-201ENST00000361575 PRMT7Q9NVM4 692 aaPredicted RBP4.88□□□□□ -1.63
RPL39-201ENST00000361575 DBNLQ9UJU6 430 aaKnown RBP4.88□□□□□ -1.63
RPL39-201ENST00000361575 ASTN2O75129 1339 aaPredicted RBP4.88□□□□□ -1.63
RPL39-201ENST00000361575 A0A0U1RQG5 324 aaPredicted RBP4.87□□□□□ -1.63
RPL39-201ENST00000361575 EDDM13A0A1B0GTR0 161 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 FAM90A26D6RGX4 464 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 H0YGN5 161 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 FDPSP14324 419 aaKnown RBP4.87□□□□□ -1.63
RPL39-201ENST00000361575 UGT1A1P22309 533 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 LMO1P25800 156 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 ALDH7A1P49419 539 aaKnown RBP4.87□□□□□ -1.63
RPL39-201ENST00000361575 HNRNPH2P55795 449 aaKnown RBP4.87□□□□□ -1.63
RPL39-201ENST00000361575 SSBP2P81877 361 aaPredicted RBP4.87□□□□□ -1.63
RPL39-201ENST00000361575 ZNF273Q14593 569 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 RBMS2Q15434 407 aaKnown RBP4.87□□□□□ -1.63
RPL39-201ENST00000361575 SYT16Q17RD7 645 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 KLHL26Q53HC5 615 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 FAM69BQ5VUD6 431 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 LRCH2Q5VUJ6 765 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 SLC36A4Q6YBV0 504 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 CENPVQ7Z7K6 275 aaPredicted RBP4.87□□□□□ -1.63
RPL39-201ENST00000361575 ZC3HC1Q86WB0 502 aaKnown RBP4.87□□□□□ -1.63
RPL39-201ENST00000361575 METTL23Q86XA0 190 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 PALB2Q86YC2 1186 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 DSELQ8IZU8 1212 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 SLC16A11Q8NCK7 471 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 ACVR1CQ8NER5 493 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 TSPAN14Q8NG11 270 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 WDR20Q8TBZ3 569 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 PIGOQ8TEQ8 1089 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 NTN5Q8WTR8 489 aaPredicted RBP4.87□□□□□ -1.63
RPL39-201ENST00000361575 DEPDC1BQ8WUY9 529 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 TAAR8Q969N4 342 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 HDAC11Q96DB2 347 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 FNBP1Q96RU3 617 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 SLC22A12Q96S37 553 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 SMC6Q96SB8 1091 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 PCYT2Q99447 389 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 NUP85Q9BW27 656 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 CATSPERBQ9H7T0 1116 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 PLAC1Q9HBJ0 212 aa4.87□□□□□ -1.63
RPL39-201ENST00000361575 XAB2Q9HCS7 855 aaKnown RBP4.87□□□□□ -1.63
RPL39-201ENST00000361575 MBNL1Q9NR56 388 aaKnown RBP4.87□□□□□ -1.63
RPL39-201ENST00000361575 A0A0B4J293 547 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 RGS14O43566 566 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 ITM2AO43736 263 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 PENKP01210 267 aaPredicted RBP4.86□□□□□ -1.63
RPL39-201ENST00000361575 HOXB2P14652 356 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 CYP11B2P19099 503 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 ACHEP22303 614 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 KELP23276 732 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 BDKRB2P30411 391 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 MXI1P50539 228 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 RAB28P51157 221 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 TGFB2P61812 414 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 MAD2L1Q13257 205 aaPredicted RBP4.86□□□□□ -1.63
RPL39-201ENST00000361575 PTGR1Q14914 329 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 TNIP1Q15025 636 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 DCST1Q5T197 706 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 ZNF626Q68DY1 528 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 SHC4Q6S5L8 630 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 Q6ZTK2 550 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 TPRG1Q6ZUI0 275 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 ZNF534Q76KX8 674 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 ERN2Q76MJ5 926 aaKnown RBP4.86□□□□□ -1.63
RPL39-201ENST00000361575 AFAP1Q8N556 730 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 ARFGAP1Q8N6T3 406 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 CAMKVQ8NCB2 501 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 MPLKIPQ8TAP9 179 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 TBC1D16Q8TBP0 767 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 NXNL1Q96CM4 212 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 SPACA9Q96E40 222 aaPredicted RBP4.86□□□□□ -1.63
RPL39-201ENST00000361575 LRFN5Q96NI6 719 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 RAB3IPQ96QF0 476 aaPredicted RBP4.86□□□□□ -1.63
RPL39-201ENST00000361575 TMEM39BQ9GZU3 492 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 C2orf40Q9H1Z8 148 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 RAD21L1Q9H4I0 556 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 NOL11Q9H8H0 719 aaKnown RBP4.86□□□□□ -1.63
RPL39-201ENST00000361575 NOX4Q9NPH5 578 aa4.86□□□□□ -1.63
RPL39-201ENST00000361575 ARGLU1Q9NWB6 273 aaPredicted RBP4.86□□□□□ -1.63
RPL39-201ENST00000361575 TRNAU1APQ9NX07 287 aaKnown RBP4.86□□□□□ -1.63
RPL39-201ENST00000361575 TRAV34A0A0B4J273 112 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 IGHV4-28A0A0C4DH34 117 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 LY6G6EA0A0G2JKS1 128 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 A0A1W2PP11 408 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 HEPACAM2A8MVW5 462 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 TMEM189-UBE2V1I3L0A0 370 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 J3QR06 171 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 SOCS6O14544 535 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 SPINT2O43291 252 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 MOSPD3O75425 235 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 VPREB1P12018 145 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 NAGAP17050 411 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 ERCC2P18074 760 aa4.85□□□□□ -1.63
RPL39-201ENST00000361575 FASLGP48023 281 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms