RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 ARL13AQ5H913 290 aaPredicted RBP13.77□□□□□ -0.21
CTR9-201ENST00000361367 PITRM1Q5JRX3 1037 aa13.77□□□□□ -0.21
CTR9-201ENST00000361367 DNAJB14Q8TBM8 379 aa13.77□□□□□ -0.21
CTR9-201ENST00000361367 SAC3D1A6NKF1 404 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 EPORP19235 508 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 ATP6V1C1P21283 382 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 CENPAP49450 140 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 DGKEP52429 567 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 CYP4F2P78329 520 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 UBAP2LQ14157 1087 aaKnown RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 ZYG11AQ6WRX3 759 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 ARHGAP36Q6ZRI8 547 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 ZNF514Q96K75 400 aaPredicted RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 TSC22D3Q99576 134 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 BDH2Q9BUT1 245 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 CDV3Q9UKY7 258 aaKnown RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 TIMM22Q9Y584 194 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 LRATO95237 230 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 CCNDBP1O95273 360 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 DLDP09622 509 aaKnown RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 ITPRIPL2Q3MIP1 535 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 WASHC2DQ5SRD0 308 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 FOXR1Q6PIV2 292 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 ITFG1Q8TB96 612 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 NUS1Q96E22 293 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 SH3GL2Q99962 352 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 UGT2B28Q9BY64 529 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 TRIT1Q9H3H1 467 aaKnown RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 MTF2Q9Y483 593 aaPredicted RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 SIPA1L3O60292 1781 aaPredicted RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 FAM47E-STBD1D6RA91 191 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 TGM5O43548 720 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 LDLRP01130 860 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 ACADSP16219 412 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 HNRNPH1P31943 449 aaKnown RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 DEFB103AP81534 67 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 DAB2P98082 770 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 SNAP47Q5SQN1 464 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 RP9Q8TA86 221 aaKnown RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 RAD51AP1Q96B01 352 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 CNBD2Q96M20 576 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 RIOK2Q9BVS4 552 aaKnown RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 NOL11Q9H8H0 719 aaKnown RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 FETUBQ9UGM5 382 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 UNC5CO95185 931 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 OTUD3Q5T2D3 398 aaPredicted RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 KRT73Q86Y46 540 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 ZNF786Q8N393 782 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 TTC9BQ8N6N2 239 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 CLIP3Q96DZ5 547 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 APOLD1Q96LR9 279 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 TSSK3Q96PN8 268 aa13.76□□□□□ -0.21
CTR9-201ENST00000361367 GATA5Q9BWX5 397 aaPredicted RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 ZNF490Q9ULM2 529 aaPredicted RBP13.76□□□□□ -0.21
CTR9-201ENST00000361367 SDK1Q7Z5N4 2213 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 OR10H2O60403 315 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 STC2O76061 302 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 UBTFL6P0CB48 400 aaPredicted RBP13.75□□□□□ -0.21
CTR9-201ENST00000361367 GNPDA1P46926 289 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 AFF1P51825 1210 aaKnown RBP13.75□□□□□ -0.21
CTR9-201ENST00000361367 WDR5P61964 334 aaKnown RBP13.75□□□□□ -0.21
CTR9-201ENST00000361367 CLCQ05315 142 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 LCP2Q13094 533 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 INTS11Q5TA45 600 aaKnown RBP13.75□□□□□ -0.21
CTR9-201ENST00000361367 R3HCC1LQ7Z5L2 792 aaKnown RBP13.75□□□□□ -0.21
CTR9-201ENST00000361367 ALYREFQ86V81 257 aaKnown RBP13.75□□□□□ -0.21
CTR9-201ENST00000361367 PARGQ86W56 976 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 UNC5BQ8IZJ1 945 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 PROX1Q92786 737 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 TADA1Q96BN2 335 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 CCT7Q99832 543 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 CCDC177Q9NQR7 707 aaPredicted RBP13.75□□□□□ -0.21
CTR9-201ENST00000361367 MYH8P13535 1937 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 CAPZA2P47755 286 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 PSME3P61289 254 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 RALGPS1Q5JS13 557 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 AMZ2Q86W34 360 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 STX19Q8N4C7 294 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 PANX1Q96RD7 426 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 WDR26Q9H7D7 661 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 SSU72Q9NP77 194 aaKnown RBP13.75□□□□□ -0.21
CTR9-201ENST00000361367 SPHK2Q9NRA0 654 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 INTS7Q9NVH2 962 aaKnown RBP13.75□□□□□ -0.21
CTR9-201ENST00000361367 POLR3HQ9Y535 204 aaPredicted RBP13.75□□□□□ -0.21
CTR9-201ENST00000361367 UPK3BL1B0FP48 263 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 UPK3BL2E5RIL1 263 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 UBXN8O00124 270 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 CLDN7O95471 211 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 CLDN9O95484 217 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 HOXB2P14652 356 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 GNA13Q14344 377 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 TIGD2Q4W5G0 525 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 GCNT7Q6ZNI0 430 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 GPR135Q8IZ08 494 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 LCN9Q8WX39 176 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 IL12RB2Q99665 862 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 EXOSC4Q9NPD3 245 aaKnown RBP13.75□□□□□ -0.21
CTR9-201ENST00000361367 SLC17A6Q9P2U8 582 aa13.75□□□□□ -0.21
CTR9-201ENST00000361367 FAM220BPB1ANY3 271 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 VAV1P15498 845 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms