RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ZNF140P52738 457 aaPredicted RBP13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 ACTR3P61158 418 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 AP2B1P63010 937 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 CDC16Q13042 620 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 TBCCQ15814 346 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 RETSATQ6NUM9 610 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 METTL3Q86U44 580 aaKnown RBP13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 ETFBKMTQ8IXQ9 262 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 CPA6Q8N4T0 437 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 ACDQ96AP0 544 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 EXOC2Q96KP1 924 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 OLFM1Q99784 485 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 C2orf49Q9BVC5 232 aaPredicted RBP13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 CATSPERZQ9NTU4 200 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 MARCH4Q9P2E8 410 aaPredicted RBP13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 F5P12259 2224 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 ANTXRLA6NF34 631 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 ANKRD66B4E2M5 251 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 TK2O00142 265 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 RNASEH1O60930 286 aaKnown RBP13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 LTA4HP09960 611 aaKnown RBP13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 DLG1Q12959 904 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 ZNF460Q14592 562 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 TRMT5Q32P41 509 aaKnown RBP13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 CFAP157Q5JU67 520 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 VWA5B1Q5TIE3 1220 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 ISLR2Q6UXK2 745 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 ATG14Q6ZNE5 492 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 GLT6D1Q7Z4J2 308 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 RNF135Q8IUD6 432 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 OR13C4Q8NGS5 318 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 DRC3Q9H069 523 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 IGSF5Q9NSI5 407 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 INTS10Q9NVR2 710 aaKnown RBP13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 HACD3Q9P035 362 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 XPR1Q9UBH6 696 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 SPO11Q9Y5K1 396 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 A0A088AWK7 358 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 SUPT3HO75486 399 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 SERPINA6P08185 405 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 RBP1P09455 135 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 ARRB2P32121 409 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 RHOAP61586 193 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 AP1S1P61966 158 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 TYSND1Q2T9J0 566 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 KLC3Q6P597 504 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 AFTPHQ6ULP2 937 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 NAPRTQ6XQN6 538 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 ADIPOR2Q86V24 386 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 SLC44A3Q8N4M1 653 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 PDCD6IPQ8WUM4 868 aaKnown RBP13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 HEXDCQ8WVB3 486 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 C17orf50Q8WW18 174 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 CCDC126Q96EE4 140 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 UBXN10Q96LJ8 280 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 TCF12Q99081 682 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 ILKAPQ9H0C8 392 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 POPDC3Q9HBV1 291 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 PNPOQ9NVS9 261 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 APOBEC2Q9Y235 224 aaKnown RBP13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 PCDHGC4Q9Y5F7 938 aa13.77□□□□□ -0.21
CSNK1E-201ENST00000359867 OR51F1A6NGY5 319 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 F8W8V4 182 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 CCL22O00626 93 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 NARSO43776 548 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 WISP3O95389 354 aaPredicted RBP13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 CISD3P0C7P0 127 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 PIRTP0C851 137 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 LPOP22079 712 aaPredicted RBP13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 OPRD1P41143 372 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 GLRBP48167 497 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 CSNK1DP48730 415 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 DNAJB13P59910 316 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 ACAP2Q15057 778 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 ITPRIPL2Q3MIP1 535 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 DNAL1Q4LDG9 190 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 IER5LQ5T953 404 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 DUS1LQ6P1R4 473 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 RNF111Q6ZNA4 994 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 LPCAT1Q8NF37 534 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 MDGA1Q8NFP4 955 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 SLC26A7Q8TE54 656 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 CIPCQ9C0C6 399 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 CDH19Q9H159 772 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 GPAMQ9HCL2 828 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 FBXO10Q9UK96 956 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 PACSIN3Q9UKS6 424 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 FCF1Q9Y324 198 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 LOC100653049A0A140TA62 436 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 SMAD6O43541 496 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 DLX3O60479 287 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 KRT34O76011 436 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 CPOXP36551 454 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 SERPINB5P36952 375 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 GRIA4P48058 902 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 STC1P52823 247 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 TRAF2Q12933 501 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 CYB5D2Q8WUJ1 264 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 NXPE3Q969Y0 559 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 DEC1Q9P2X7 70 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms