RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 HPS1Q92902 700 aa12.18□□□□□ -0.46
COL20A1-201ENST00000358894 TRIM8Q9BZR9 551 aa12.18□□□□□ -0.46
COL20A1-201ENST00000358894 DMTF1Q9Y222 760 aa12.18□□□□□ -0.46
COL20A1-201ENST00000358894 PRELID1Q9Y255 219 aa12.18□□□□□ -0.46
COL20A1-201ENST00000358894 U3KQV3 271 aa12.18□□□□□ -0.46
COL20A1-201ENST00000358894 PHIPQ8WWQ0 1821 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 INSIG1O15503 277 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 GABBR2O75899 941 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 LRATO95237 230 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 FAM163BP0C2L3 166 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 MTHFD1P11586 935 aaKnown RBP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 EPB42P16452 691 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 HSPA7P48741 367 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 RAD23AP54725 363 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 HERVK_113P63132 956 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 GRIN3AQ8TCU5 1115 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 COX4I2Q96KJ9 171 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 ERVK-6Q9BXR3 956 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 CLK4Q9HAZ1 481 aaKnown RBP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 SCN3BQ9NY72 215 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 SLC45A1Q9Y2W3 748 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 FADS3Q9Y5Q0 445 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 MYO9BQ13459 2157 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 LOXHD1Q8IVV2 1947 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 BBIP1A8MTZ0 92 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 ZSCAN9O15535 394 aaPredicted RBP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 KCNH1O95259 989 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 IGSF6O95976 241 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 POLR2JP52435 117 aaKnown RBP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 ST8SIA6P61647 398 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 SP3Q02447 781 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 SULT2A1Q06520 285 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 BTG3Q14201 252 aaPredicted RBP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 POM121L1PQ3SYA9 428 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 ZNF621Q6ZSS3 439 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 ADCK2Q7Z695 626 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 ASB9Q96DX5 294 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 MFSD1Q9H3U5 465 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 ALG2Q9H553 416 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 TRIM39Q9HCM9 518 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 EVLQ9UI08 416 aaPredicted RBP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 GPC6Q9Y625 555 aaPredicted RBP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 ANKRD31Q8N7Z5 1873 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 CDC7O00311 574 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 GABRDO14764 452 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 RGS5O15539 181 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 ZNF865P0CJ78 1059 aaPredicted RBP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 S100A5P33763 92 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 ARSDP51689 593 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 TXNDC11Q6PKC3 985 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 FUBP3Q96I24 572 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 TSGA13Q96PP4 275 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 OLFM1Q99784 485 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 UGT2B28Q9BY64 529 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 CACYBPQ9HB71 228 aaKnown RBP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 SH3BP4Q9P0V3 963 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 MARCH4Q9P2E8 410 aaPredicted RBP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 GALPQ9UBC7 116 aa12.17□□□□□ -0.46
COL20A1-201ENST00000358894 FCF1Q9Y324 198 aaKnown RBP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 FAM32AQ9Y421 112 aaKnown RBP12.17□□□□□ -0.46
COL20A1-201ENST00000358894 LRRC14BA6NHZ5 514 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 BOLA2-SMG1P6H3BVE0 249 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 ENPP3O14638 875 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 OTCP00480 354 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 NTRK1P04629 796 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 HPCAP84074 193 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 ATXN7L2Q5T6C5 722 aaPredicted RBP12.16□□□□□ -0.46
COL20A1-201ENST00000358894 GLYATQ6IB77 296 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 ZDHHC6Q9H6R6 413 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 FLRT1Q9NZU1 646 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 CARD8Q9Y2G2 431 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 PTGDR2Q9Y5Y4 395 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 CHRNA1P02708 482 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 ANXA5P08758 320 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 SERPINA4P29622 427 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 ILF2Q12905 390 aaKnown RBP12.16□□□□□ -0.46
COL20A1-201ENST00000358894 MAD2L1Q13257 205 aaPredicted RBP12.16□□□□□ -0.46
COL20A1-201ENST00000358894 USP41Q3LFD5 358 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 EID3Q8N140 333 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 TSSK3Q96PN8 268 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 BBS2Q9BXC9 721 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 MAGEH1Q9H213 219 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 IPPKQ9H8X2 491 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 GPBP1L1Q9HC44 474 aaPredicted RBP12.16□□□□□ -0.46
COL20A1-201ENST00000358894 CACNA2D2Q9NY47 1150 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 NME7Q9Y5B8 376 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 TMEM247A6NEH6 219 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 CNOT3O75175 753 aaKnown RBP12.16□□□□□ -0.46
COL20A1-201ENST00000358894 SLC25A14O95258 325 aaPredicted RBP12.16□□□□□ -0.46
COL20A1-201ENST00000358894 GSNP06396 782 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 MAPKAPK2P49137 400 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 TNK2Q07912 1038 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 HERC3Q15034 1050 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 KIAA0319Q5VV43 1072 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 ABRAXAS1Q6UWZ7 409 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 YME1L1Q96TA2 773 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 RIBC2Q9H4K1 309 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 COQ6Q9Y2Z9 468 aa12.16□□□□□ -0.46
COL20A1-201ENST00000358894 CAB39Q9Y376 341 aaPredicted RBP12.16□□□□□ -0.46
COL20A1-201ENST00000358894 A0A0D9SEW6 157 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms