RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 ZNF678Q5SXM1 525 aa17.48■□□□□ 0.39
NPAS3-202ENST00000356141 ADIPOR2Q86V24 386 aa17.48■□□□□ 0.39
NPAS3-202ENST00000356141 DEFB107AQ8IZN7 70 aa17.48■□□□□ 0.39
NPAS3-202ENST00000356141 BEND7Q8N7W2 519 aaPredicted RBP17.48■□□□□ 0.39
NPAS3-202ENST00000356141 ACOX2Q99424 681 aa17.48■□□□□ 0.39
NPAS3-202ENST00000356141 NPAS2Q99743 824 aa17.48■□□□□ 0.39
NPAS3-202ENST00000356141 EIF2B4Q9UI10 523 aaKnown RBP17.48■□□□□ 0.39
NPAS3-202ENST00000356141 SLC25A13Q9UJS0 675 aa17.48■□□□□ 0.39
NPAS3-202ENST00000356141 PIKFYVEQ9Y2I7 2098 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 VPS26AO75436 327 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 HMGCLP35914 325 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 HK3P52790 923 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 COPAP53621 1224 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 RARS2Q5T160 578 aaKnown RBP17.47■□□□□ 0.39
NPAS3-202ENST00000356141 FBXO39Q8N4B4 442 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 FAM156AQ8NDB6 213 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 CFAP61Q8NHU2 1237 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 RDH11Q8TC12 318 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 CD200R1Q8TD46 325 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 ZNF707Q96C28 371 aaPredicted RBP17.47■□□□□ 0.39
NPAS3-202ENST00000356141 CCDC167Q9P0B6 97 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 LEFTY1O75610 366 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 SLC25A14O95258 325 aaPredicted RBP17.47■□□□□ 0.39
NPAS3-202ENST00000356141 ENO3P13929 434 aaPredicted RBP17.47■□□□□ 0.39
NPAS3-202ENST00000356141 OGNP20774 298 aaKnown RBP17.47■□□□□ 0.39
NPAS3-202ENST00000356141 PKNOX1P55347 436 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 AP1S1P61966 158 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 SNRPD1P62314 119 aaKnown RBP17.47■□□□□ 0.39
NPAS3-202ENST00000356141 CCDC6Q16204 474 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 ATP13A5Q4VNC0 1218 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 ACSBG2Q5FVE4 666 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 MYLK4Q86YV6 388 aaPredicted RBP17.47■□□□□ 0.39
NPAS3-202ENST00000356141 NUDT8Q8WV74 236 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 PBXIP1Q96AQ6 731 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 B4GALT6Q9UBX8 382 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 LNPEPQ9UIQ6 1025 aa17.47■□□□□ 0.39
NPAS3-202ENST00000356141 GLYATL1P3A0A0U1RQE8 302 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 NAT1P18440 290 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 WASP42768 502 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 KPNA2P52292 529 aaKnown RBP17.46■□□□□ 0.39
NPAS3-202ENST00000356141 KRT72Q14CN4 511 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 ACAD11Q709F0 780 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 FAM217AQ8IXS0 508 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 GPR150Q8NGU9 434 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 HERVK_113Q902F9 699 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 WRAP53Q9BUR4 548 aaKnown RBP17.46■□□□□ 0.39
NPAS3-202ENST00000356141 TRIM8Q9BZR9 551 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 CLPBQ9H078 707 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 SUV39H2Q9H5I1 410 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 DUS2Q9NX74 493 aaKnown RBP17.46■□□□□ 0.39
NPAS3-202ENST00000356141 COQ6Q9Y2Z9 468 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 DENND4CQ5VZ89 1909 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 EPOPA6NHQ4 379 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 SDHDO14521 159 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 COX4I1P13073 169 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 PIK3R1P27986 724 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 TTPAP49638 278 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 NFATC2Q13469 925 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 RBBP7Q16576 425 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 HPS6Q86YV9 775 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 CPXM2Q8N436 756 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 NXPE3Q969Y0 559 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 VOPP1Q96AW1 172 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 RCN3Q96D15 328 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 IL1RL2Q9HB29 575 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 TRAF6Q9Y4K3 522 aa17.46■□□□□ 0.39
NPAS3-202ENST00000356141 COPG1Q9Y678 874 aaKnown RBP17.46■□□□□ 0.39
NPAS3-202ENST00000356141 F5P12259 2224 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 XYLBO75191 536 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 PEX11AO75192 247 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 CRCPO75575 148 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 POLR2EP19388 210 aaKnown RBP17.45■□□□□ 0.38
NPAS3-202ENST00000356141 GRM2Q14416 872 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 RBBP5Q15291 538 aaKnown RBP17.45■□□□□ 0.38
NPAS3-202ENST00000356141 ULK2Q8IYT8 1036 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 OR2A12Q8NGT7 310 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 FOXJ1Q92949 421 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 FUBP1Q96AE4 644 aaKnown RBP17.45■□□□□ 0.38
NPAS3-202ENST00000356141 ATOH8Q96SQ7 321 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 PBX4Q9BYU1 374 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 BRD9Q9H8M2 597 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 ADAMTS6Q9UKP5 1117 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 WASF2Q9Y6W5 498 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 LAMA1P25391 3075 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 PTSQ03393 145 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 RCN1Q15293 331 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 ZNF77Q15935 545 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 C1orf146Q5VVC0 180 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 ZNF783Q6ZMS7 281 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 VN1R2Q8NFZ6 395 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 LATS2Q9NRM7 1088 aa17.45■□□□□ 0.38
NPAS3-202ENST00000356141 KPNA3O00505 521 aaPredicted RBP17.44■□□□□ 0.38
NPAS3-202ENST00000356141 LINC01565O15544 149 aa17.44■□□□□ 0.38
NPAS3-202ENST00000356141 CDK14O94921 469 aa17.44■□□□□ 0.38
NPAS3-202ENST00000356141 TPBGLP0DKB5 382 aa17.44■□□□□ 0.38
NPAS3-202ENST00000356141 ETV3P41162 512 aa17.44■□□□□ 0.38
NPAS3-202ENST00000356141 RECQLP46063 649 aaPredicted RBP17.44■□□□□ 0.38
NPAS3-202ENST00000356141 IL2P60568 153 aa17.44■□□□□ 0.38
NPAS3-202ENST00000356141 DHCR24Q15392 516 aa17.44■□□□□ 0.38
NPAS3-202ENST00000356141 Q6ZVL8 140 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms