RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 TMEM26Q6ZUK4 368 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 MCF2L2Q86YR7 1114 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 RELL1Q8IUW5 271 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 RHOT2Q8IXI1 618 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 BEND7Q8N7W2 519 aaPredicted RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 KYQ8NBH2 561 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 EXT2Q93063 718 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 FKBP10Q96AY3 582 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 HERC2P3Q9BVR0 1158 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 NIF3L1Q9GZT8 377 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 ZNF302Q9NR11 478 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 C5AR2Q9P296 337 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.59□□□□□ -1.51
CD47-201ENST00000355354 THADAQ6YHU6 1953 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 UBE4BO95155 1302 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 PRR23AA6NEV1 266 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 C4orf47A7E2U8 309 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 NOBOXO60393 691 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 ATP6V1G1O75348 118 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 PTPN6P29350 595 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 MTPNP58546 118 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 PLAURQ03405 335 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 C6orf118Q5T5N4 469 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 SPPL2CQ8IUH8 684 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 CHERPQ8IWX8 916 aaKnown RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 FIBCD1Q8N539 461 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 CELF5Q8N6W0 485 aaKnown RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 GSTO2Q9H4Y5 243 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 FAM8A1Q9UBU6 413 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 MSRAQ9UJ68 235 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 DLGAP4Q9Y2H0 992 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 PPME1Q9Y570 386 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 ZNF106Q9H2Y7 1883 aaKnown RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 A0A096LPK6 155 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 H7C0C1 242 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 PLK4O00444 970 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 ATXN8OSP0DMR3 200 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 MAGEB1P43366 347 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 ATP5OP48047 213 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 POU5F1BQ06416 359 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 LRP8Q14114 963 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 GALNT3Q14435 633 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 PSMD5Q16401 504 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 MPEG1Q2M385 716 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 LETMD1Q6P1Q0 360 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 CASC4Q6P4E1 433 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 PRSS55Q6UWB4 352 aaPredicted RBP5.59□□□□□ -1.52
CD47-201ENST00000355354 RGS9BPQ6ZS82 235 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 TSPAN33Q86UF1 283 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 PIWIL2Q8TC59 973 aaKnown RBP5.59□□□□□ -1.52
CD47-201ENST00000355354 CENPIQ92674 756 aaPredicted RBP5.59□□□□□ -1.52
CD47-201ENST00000355354 SLC35B4Q969S0 331 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 TMA16Q96EY4 203 aaKnown RBP5.59□□□□□ -1.52
CD47-201ENST00000355354 CDCA3Q99618 268 aaPredicted RBP5.59□□□□□ -1.52
CD47-201ENST00000355354 PCDH9Q9HC56 1237 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 VANGL2Q9ULK5 521 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 CEPT1Q9Y6K0 416 aa5.59□□□□□ -1.52
CD47-201ENST00000355354 M0QYT0 321 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 CES2O00748 559 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 ZNF821O75541 412 aaPredicted RBP5.58□□□□□ -1.52
CD47-201ENST00000355354 PGRP06401 933 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 NCF2P19878 526 aaPredicted RBP5.58□□□□□ -1.52
CD47-201ENST00000355354 FEN1P39748 380 aaKnown RBP5.58□□□□□ -1.52
CD47-201ENST00000355354 MLLT3P42568 568 aaPredicted RBP5.58□□□□□ -1.52
CD47-201ENST00000355354 ZNF143P52747 638 aaPredicted RBP5.58□□□□□ -1.52
CD47-201ENST00000355354 AP1B1Q10567 949 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 GRIK4Q16099 956 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 TMEM150AQ86TG1 271 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 FAM219AQ8IW50 185 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 ANKFN1Q8N957 763 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 MDGA1Q8NFP4 955 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 OR7D4Q8NG98 312 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 CGRRF1Q99675 332 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 TSG101Q99816 390 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 CENPOQ9BU64 300 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 OSBPL11Q9BXB4 747 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 TRIM4Q9C037 500 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 SPNS1Q9H2V7 528 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 MRPL11Q9Y3B7 192 aaKnown RBP5.58□□□□□ -1.52
CD47-201ENST00000355354 SH3BP1Q9Y3L3 701 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 PRSS21Q9Y6M0 314 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 KIAA1549Q9HCM3 1950 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 FAM86C2PA6NEL3 165 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 CKMP06732 381 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 PTPN4P29074 926 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 FOLH1Q04609 750 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 OCA2Q04671 838 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 LSAMPQ13449 338 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 SF3B4Q15427 424 aaKnown RBP eCLIP5.58□□□□□ -1.523e-15■■■□□ 14.7
CD47-201ENST00000355354 ENPP6Q6UWR7 440 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 SLC16A12Q6ZSM3 486 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 VTCN1Q7Z7D3 282 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 CACUL1Q86Y37 369 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 SLC15A3Q8IY34 581 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 ARFGAP2Q8N6H7 521 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 CCNYQ8ND76 341 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 LPGAT1Q92604 370 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 CCDC47Q96A33 483 aaKnown RBP5.58□□□□□ -1.52
CD47-201ENST00000355354 RHBDF1Q96CC6 855 aa5.58□□□□□ -1.52
CD47-201ENST00000355354 LRRC45Q96CN5 670 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms