RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 BRD9Q9H8M2 597 aa6.86□□□□□ -1.31
TRIM55-203ENST00000350034 LATS2Q9NRM7 1088 aa6.86□□□□□ -1.31
TRIM55-203ENST00000350034 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.86□□□□□ -1.31
TRIM55-203ENST00000350034 KLHL42Q9P2K6 505 aa6.86□□□□□ -1.31
TRIM55-203ENST00000350034 NFKBIL1Q9UBC1 381 aaPredicted RBP6.86□□□□□ -1.31
TRIM55-203ENST00000350034 DKK3Q9UBP4 350 aa6.86□□□□□ -1.31
TRIM55-203ENST00000350034 BAIAP2L1Q9UHR4 511 aa6.86□□□□□ -1.31
TRIM55-203ENST00000350034 TRMT6Q9UJA5 497 aaKnown RBP6.86□□□□□ -1.31
TRIM55-203ENST00000350034 CDYLQ9Y232 598 aa6.86□□□□□ -1.31
TRIM55-203ENST00000350034 FAM50BQ9Y247 325 aa6.86□□□□□ -1.31
TRIM55-203ENST00000350034 SLC27A6Q9Y2P4 619 aa6.86□□□□□ -1.31
TRIM55-203ENST00000350034 YBX2Q9Y2T7 364 aaKnown RBP6.86□□□□□ -1.31
TRIM55-203ENST00000350034 MRPS23Q9Y3D9 190 aaKnown RBP6.86□□□□□ -1.31
TRIM55-203ENST00000350034 TRAF6Q9Y4K3 522 aa6.86□□□□□ -1.31
TRIM55-203ENST00000350034 WASF2Q9Y6W5 498 aa6.86□□□□□ -1.31
TRIM55-203ENST00000350034 HELZP42694 1942 aaKnown RBP6.86□□□□□ -1.31
TRIM55-203ENST00000350034 EPG5Q9HCE0 2579 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 IGLV3-16A0A075B6K0 115 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 GOLGA8QA0A0J9YX86 632 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 GLYATL1P3A0A0U1RQE8 302 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 GOLGA8OA6NCC3 632 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 NPEPPSL1A6NEC2 478 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 GOLGA8CPA6NN73 597 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 SYCE1LA8MT33 242 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 E9PBE3 544 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 GOLGA8NF8WBI6 632 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 CDC7O00311 574 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 CHUKO15111 745 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 TRIM24O15164 1050 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 GPR39O43194 453 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 DCXO43602 365 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 KLHL41O60662 606 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 PEX11AO75192 247 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 TM7SF2O76062 418 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 SUPT7LO94864 414 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 SRPRAP08240 638 aaKnown RBP6.85□□□□□ -1.31
TRIM55-203ENST00000350034 C1SP09871 688 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 CHRM1P11229 460 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-203ENST00000350034 COX4I1P13073 169 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 POLR2EP19388 210 aaKnown RBP6.85□□□□□ -1.31
TRIM55-203ENST00000350034 NCF2P19878 526 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-203ENST00000350034 CCND1P24385 295 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 PIK3R1P27986 724 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 EPHA3P29320 983 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 PGM1P36871 562 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 SPINT3P49223 89 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 HK3P52790 923 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 COPAP53621 1224 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 SH3BP2P78314 561 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 KDSRQ06136 332 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 CBX2Q14781 532 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-203ENST00000350034 SHHQ15465 462 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 TSNQ15631 228 aaKnown RBP6.85□□□□□ -1.31
TRIM55-203ENST00000350034 CRY1Q16526 586 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 EML3Q32P44 896 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 GPRC6AQ5T6X5 926 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 KANK2Q63ZY3 851 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 LRRC66Q68CR7 880 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 PGM2L1Q6PCE3 622 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 BRAT1Q6PJG6 821 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 GDPD4Q6W3E5 623 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 Q6ZVU0 165 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 RAB44Q7Z6P3 723 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-203ENST00000350034 NPAS3Q8IXF0 933 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 CPNE9Q8IYJ1 553 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 CLYBLQ8N0X4 340 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 ARHGAP24Q8N264 748 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 NXPE1Q8N323 547 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 RYBPQ8N488 228 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-203ENST00000350034 FBXO39Q8N4B4 442 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 AFAP1L2Q8N4X5 818 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 ENDOVQ8N8Q3 282 aaKnown RBP6.85□□□□□ -1.31
TRIM55-203ENST00000350034 VN1R2Q8NFZ6 395 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 CEP70Q8NHQ1 597 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 RP9Q8TA86 221 aaKnown RBP6.85□□□□□ -1.31
TRIM55-203ENST00000350034 AGR3Q8TD06 166 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 LKAAEAR1Q8TD35 194 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 AGAP11Q8TF27 550 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 ZNF483Q8TF39 744 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-203ENST00000350034 EEF1AKMT1Q8WVE0 214 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 ING5Q8WYH8 240 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 FAM136AQ96C01 138 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 CMTM5Q96DZ9 223 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 LINGO1Q96FE5 620 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 LRIG1Q96JA1 1093 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 PLEKHG4BQ96PX9 1271 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 TTC1Q99614 292 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 HEPHQ9BQS7 1158 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 RTKNQ9BST9 563 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 HTATIP2Q9BUP3 242 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 BOCQ9BWV1 1114 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 ASB8Q9H765 288 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 SFXN1Q9H9B4 322 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 TRPV4Q9HBA0 871 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 SMOXQ9NWM0 555 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 DUS2Q9NX74 493 aaKnown RBP6.85□□□□□ -1.31
TRIM55-203ENST00000350034 OBP2AQ9NY56 170 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 ZDHHC3Q9NYG2 299 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 GTSE1Q9NYZ3 720 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 B4GALT6Q9UBX8 382 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms