RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CBLBQ13191 982 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 PTK2BQ14289 1009 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 TBCCQ15814 346 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 ZNF678Q5SXM1 525 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 AFTPHQ6ULP2 937 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 MBOAT1Q6ZNC8 495 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 CYB5D2Q8WUJ1 264 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 MYO19Q96H55 970 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 HGH1Q9BTY7 390 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 LCHNA4D1U4 455 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 CD160O95971 181 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 FOLH1Q04609 750 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 TMEM25Q86YD3 366 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 HJURPQ8NCD3 748 aaPredicted RBP13.79□□□□□ -0.2
TRIM4-201ENST00000349062 C2orf15Q8WU43 125 aaKnown RBP13.79□□□□□ -0.2
TRIM4-201ENST00000349062 PPWD1Q96BP3 646 aaKnown RBP13.79□□□□□ -0.2
TRIM4-201ENST00000349062 LRCH3Q96II8 777 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 CNDP1Q96KN2 507 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 GSTO2Q9H4Y5 243 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 AKTIPQ9H8T0 292 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 EFCAB1Q9HAE3 211 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 EGFL7Q9UHF1 273 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 ZNHIT2Q9UHR6 403 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 BACE2Q9Y5Z0 518 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 HCFC2Q9Y5Z7 792 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 DNAH14Q0VDD8 3507 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 F5P12259 2224 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 CDK14O94921 469 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 ABLIM3O94929 683 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 GNRH1P01148 92 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 DIO3P55073 304 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 INHBCP55103 352 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 CCNIQ14094 377 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 SLC44A4Q53GD3 710 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 TRIM74Q86UV6 250 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 TRIM73Q86UV7 250 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 FBXW8Q8N3Y1 598 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 KREMEN2Q8NCW0 462 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 VPS33AQ96AX1 596 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 EID2BQ96D98 161 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 C19orf60Q96EN9 201 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 UBXN10Q96LJ8 280 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 PRPF18Q99633 342 aaKnown RBP13.79□□□□□ -0.2
TRIM4-201ENST00000349062 F8W8V4 182 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 CLPTM1O96005 669 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 DPP6P42658 865 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 RAP1GDS1P52306 607 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 ERVFC1P60507 584 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 MS4A2Q01362 244 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 TAF1AQ15573 450 aaPredicted RBP13.78□□□□□ -0.2
TRIM4-201ENST00000349062 RETSATQ6NUM9 610 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 Q6ZVU0 165 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 SERPINA9Q86WD7 417 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 GPSM1Q86YR5 675 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 TWIST2Q8WVJ9 160 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 SIKE1Q9BRV8 207 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 C2orf49Q9BVC5 232 aaPredicted RBP13.78□□□□□ -0.2
TRIM4-201ENST00000349062 BBS2Q9BXC9 721 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 CLPBQ9H078 707 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 ZFYVE1Q9HBF4 777 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 NLE1Q9NVX2 485 aaPredicted RBP13.78□□□□□ -0.2
TRIM4-201ENST00000349062 OGDHLQ9ULD0 1010 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 ZNF711Q9Y462 761 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 ANGPTL3Q9Y5C1 460 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 A0A1W2PQ67 120 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 CCNT2O60583 730 aaKnown RBP13.78□□□□□ -0.2
TRIM4-201ENST00000349062 OR4F21O95013 312 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 HNRNPCP07910 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
TRIM4-201ENST00000349062 UQCRBP14927 111 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 IMPDH1P20839 514 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 FDXRP22570 491 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 CTNNB1P35222 781 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 ZNF140P52738 457 aaPredicted RBP13.78□□□□□ -0.2
TRIM4-201ENST00000349062 IL2P60568 153 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 ZNF648Q5T619 568 aaPredicted RBP13.78□□□□□ -0.2
TRIM4-201ENST00000349062 ELMOD1Q8N336 334 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 OR52B6Q8NGF0 335 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 STAG3L4Q8TBR4 150 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 LPGAT1Q92604 370 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 TRIB3Q96RU7 358 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 SLC46A2Q9BY10 475 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 ATXN10Q9UBB4 475 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 VTI1BQ9UEU0 232 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 DTNAQ9Y4J8 743 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 DNAJC15Q9Y5T4 150 aa13.78□□□□□ -0.2
TRIM4-201ENST00000349062 PAPSS2O95340 614 aaPredicted RBP13.77□□□□□ -0.2
TRIM4-201ENST00000349062 CCR2P41597 374 aa13.77□□□□□ -0.2
TRIM4-201ENST00000349062 TIAL1Q01085 375 aaKnown RBP eCLIP13.77□□□□□ -0.2
TRIM4-201ENST00000349062 CLCQ05315 142 aa13.77□□□□□ -0.2
TRIM4-201ENST00000349062 HSPA14Q0VDF9 509 aa13.77□□□□□ -0.2
TRIM4-201ENST00000349062 CEACAM7Q14002 265 aa13.77□□□□□ -0.2
TRIM4-201ENST00000349062 CRIPAKQ8N1N5 446 aa13.77□□□□□ -0.2
TRIM4-201ENST00000349062 WNT6Q9Y6F9 365 aa13.77□□□□□ -0.2
TRIM4-201ENST00000349062 E7ENX8 843 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 AZIN1O14977 448 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 AXIN1O15169 862 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 SLC25A14O95258 325 aaPredicted RBP13.77□□□□□ -0.21
TRIM4-201ENST00000349062 F11P03951 625 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 MYOGP15173 224 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 PSMC3P17980 439 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms